Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 DNM1P47-203ENST00000571780 12667 ntBASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 FRG1CP-201ENST00000358464 769 ntBASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 RNU6-1249P-201ENST00000363237 111 ntBASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 RNA5SP28-201ENST00000363841 119 ntBASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 RNU6-831P-201ENST00000384548 107 ntBASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 AC092651.1-201ENST00000426110 312 ntBASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 Y_RNA.632-201ENST00000459189 102 ntBASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 RNU6-1208P-201ENST00000459588 107 ntBASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 RPL21P8-201ENST00000465083 535 ntBASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 TRBVA-201ENST00000498804 316 ntBASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 AC010350.1-201ENST00000504908 231 ntBASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 SNORD84-203ENST00000584275 78 ntBASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 AC008814.1-201ENST00000603797 406 ntBASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 AC021646.1-201ENST00000605469 484 ntBASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 AC090229.1-201ENST00000590983 1609 ntBASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
TMEM88BA6NKF7 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 AL590240.1-201ENST00000334118 313 ntBASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 Y_RNA.162-201ENST00000363683 102 ntBASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 SNORD113.2-201ENST00000364166 89 ntBASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 SNORD56.6-201ENST00000384569 71 ntBASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 Y_RNA.576-201ENST00000384781 102 ntBASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 AL583835.1-201ENST00000399570 407 ntBASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 RPL7P46-201ENST00000425129 740 ntBASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 KCTD9P3-201ENST00000434597 1169 ntBASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 AL161722.2-201ENST00000434731 981 ntBASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 AL589765.3-201ENST00000446084 462 ntBASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 snoU13.3-201ENST00000459441 104 ntBASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 AC004801.2-202ENST00000463559 283 ntBASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 GLUD1P3-202ENST00000508551 200 ntBASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 KLHL2P1-201ENST00000508691 521 ntBASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 RPL39P5-202ENST00000512505 151 ntBASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 AC008694.2-201ENST00000517591 306 ntBASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 HPRT1P3-201ENST00000539521 576 ntBASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 AP000763.2-201ENST00000540641 163 ntBASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 AC106782.4-201ENST00000568264 210 ntBASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 AL683813.2-201ENST00000605245 502 ntBASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 AC092807.2-201ENST00000609367 243 ntBASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 uc_338.15-201ENST00000615470 191 ntBASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 ZYXP1-201ENST00000617638 118 ntBASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 AL357559.1-201ENST00000622228 274 ntBASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 AC243312.2-201ENST00000623340 601 ntBASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 IARS-213ENST00000627121 4587 ntTSL 5 BASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 AL596275.2-208ENST00000641192 594 ntBASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 AL049555.1-201ENST00000562834 1933 ntBASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 AL731566.1-201ENST00000620490 1937 ntBASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
TMEM88BA6NKF7 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms