Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 RNA5SP258-201ENST00000362750 119 ntBASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 RNU11-4P-201ENST00000391149 133 ntBASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 RPS7P13-201ENST00000413955 498 ntBASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 AC109583.1-201ENST00000432156 268 ntBASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 MTCO3P5-201ENST00000433620 714 ntBASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 AL353706.1-201ENST00000436728 494 ntBASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 MTCO1P19-201ENST00000443487 500 ntBASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 RPL7P36-201ENST00000444633 681 ntBASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 SNRPFP4-201ENST00000456366 242 ntBASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 AC093677.1-201ENST00000514414 678 ntBASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 AC022655.2-201ENST00000577280 318 ntBASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 TPMTP1-201ENST00000592307 737 ntBASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 IGHV3-29-201ENST00000604817 344 ntBASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 AC087752.4-201ENST00000605911 462 ntBASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 RNA5SP108-201ENST00000605921 117 ntBASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 DCAF13P1-201ENST00000495256 1330 ntBASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 AC027287.1-201ENST00000553115 1453 ntBASIC4.94□□□□□ -1.62
CHMP4CQ96CF2 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 RLIMP1-201ENST00000339626 1680 ntBASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 RNY4P24-201ENST00000362735 96 ntBASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 RNU6-97P-201ENST00000363387 104 ntBASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 Y_RNA.234-201ENST00000364409 97 ntBASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 RNU5E-5P-201ENST00000365379 116 ntBASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 RNU6-809P-201ENST00000384461 107 ntBASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 RNU6-837P-201ENST00000391056 108 ntBASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 RAC1P3-201ENST00000416129 580 ntBASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 Z97055.1-201ENST00000419730 712 ntBASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 AL391219.1-201ENST00000422570 483 ntBASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 AL353748.1-201ENST00000440753 474 ntBASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 ST13P20-201ENST00000447996 1065 ntBASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 AL451050.1-201ENST00000450126 415 ntBASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 TPTE2P5-203ENST00000458118 728 ntBASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 MIR3160-1-201ENST00000577972 85 ntBASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 AC103987.3-201ENST00000582071 292 ntBASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 MIR3611-201ENST00000584484 83 ntBASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 BCRP9-201ENST00000605312 388 ntBASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 AL109618.2-201ENST00000605527 211 ntBASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 AC091965.4-201ENST00000607691 587 ntBASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 AC092656.1-203ENST00000624134 423 ntBASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 AL049780.3-201ENST00000624612 1583 ntBASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CHMP4CQ96CF2 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 Y_RNA.194-201ENST00000363985 102 ntBASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 SNORD74.4-201ENST00000364129 80 ntBASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 RN7SKP263-201ENST00000411194 309 ntBASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 JKAMPP1-201ENST00000413804 919 ntBASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 AC245052.5-201ENST00000416320 649 ntBASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 AC127526.1-201ENST00000417526 366 ntBASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 AIMP1P1-201ENST00000418670 937 ntBASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 AL445669.1-201ENST00000426743 755 ntBASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 AC006548.1-201ENST00000427470 102 ntBASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC4.92□□□□□ -1.62
CHMP4CQ96CF2 GDI2P2-201ENST00000445131 608 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms