Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PTPN1P18031 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC4.89□□□□□ -1.63
PTPN1P18031 Y_RNA.72-201ENST00000362894 103 ntBASIC4.89□□□□□ -1.63
PTPN1P18031 RNU1-130P-201ENST00000363930 160 ntBASIC4.89□□□□□ -1.63
PTPN1P18031 RNU6-108P-201ENST00000365558 107 ntBASIC4.89□□□□□ -1.63
PTPN1P18031 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
PTPN1P18031 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC4.89□□□□□ -1.63
PTPN1P18031 OR9R1P-201ENST00000412200 877 ntBASIC4.89□□□□□ -1.63
PTPN1P18031 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.89□□□□□ -1.63
PTPN1P18031 AC009302.1-201ENST00000417147 390 ntBASIC4.89□□□□□ -1.63
PTPN1P18031 RPS15AP12-201ENST00000419498 388 ntBASIC4.89□□□□□ -1.63
PTPN1P18031 ELOCP4-201ENST00000420090 333 ntBASIC4.89□□□□□ -1.63
PTPN1P18031 UQCRBP1-201ENST00000421129 336 ntBASIC4.89□□□□□ -1.63
PTPN1P18031 RPL23AP1-201ENST00000428990 471 ntBASIC4.89□□□□□ -1.63
PTPN1P18031 AL606489.2-201ENST00000433886 234 ntBASIC4.89□□□□□ -1.63
PTPN1P18031 TDGF1P1-201ENST00000445734 527 ntBASIC4.89□□□□□ -1.63
PTPN1P18031 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.89□□□□□ -1.63
PTPN1P18031 ISCUP1-201ENST00000454451 448 ntBASIC4.89□□□□□ -1.63
PTPN1P18031 RPS20P20-201ENST00000460498 340 ntBASIC4.89□□□□□ -1.63
PTPN1P18031 RPL39P36-201ENST00000490784 156 ntBASIC4.89□□□□□ -1.63
PTPN1P18031 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.89□□□□□ -1.63
PTPN1P18031 AC110792.2-201ENST00000510278 224 ntBASIC4.89□□□□□ -1.63
PTPN1P18031 RNU6-835P-201ENST00000516974 104 ntBASIC4.89□□□□□ -1.63
PTPN1P18031 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.89□□□□□ -1.63
PTPN1P18031 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC4.89□□□□□ -1.63
PTPN1P18031 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.89□□□□□ -1.63
PTPN1P18031 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.89□□□□□ -1.63
PTPN1P18031 AC069061.3-201ENST00000582254 823 ntBASIC4.89□□□□□ -1.63
PTPN1P18031 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.89□□□□□ -1.63
PTPN1P18031 AC010680.3-201ENST00000604215 520 ntBASIC4.89□□□□□ -1.63
PTPN1P18031 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
PTPN1P18031 MTND1P37-201ENST00000636562 264 ntBASIC4.89□□□□□ -1.63
PTPN1P18031 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTPN1P18031 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
PTPN1P18031 SAGE4P-201ENST00000442271 3381 ntBASIC4.89□□□□□ -1.63
PTPN1P18031 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.89□□□□□ -1.63
PTPN1P18031 AC108751.5-201ENST00000492880 1336 ntBASIC4.89□□□□□ -1.63
PTPN1P18031 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTPN1P18031 MTND4P23-201ENST00000447723 1363 ntBASIC4.89□□□□□ -1.63
PTPN1P18031 AC125257.1-201ENST00000560400 2930 ntBASIC4.89□□□□□ -1.63
PTPN1P18031 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTPN1P18031 AC114546.3-201ENST00000623582 1734 ntBASIC4.89□□□□□ -1.63
PTPN1P18031 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
PTPN1P18031 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PTPN1P18031 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.88□□□□□ -1.63
PTPN1P18031 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.88□□□□□ -1.63
PTPN1P18031 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.88□□□□□ -1.63
PTPN1P18031 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
PTPN1P18031 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 RNU6-1097P-201ENST00000363586 107 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 Y_RNA.509-201ENST00000384506 99 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 Y_RNA.535-201ENST00000384612 99 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 U3.20-201ENST00000390909 217 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 RN7SKP247-201ENST00000411094 308 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 FAR2P2-201ENST00000413041 594 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.88□□□□□ -1.63
PTPN1P18031 EIF1P3-201ENST00000423841 334 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 FAR2P4-202ENST00000425399 584 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 RPEP3-201ENST00000425462 676 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 AC068287.1-201ENST00000430283 295 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 GPR143P-201ENST00000434155 205 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 CEACAMP1-201ENST00000434624 1035 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 BNIP3P2-201ENST00000441221 577 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 AL031584.1-201ENST00000447169 754 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 TPT1P13-201ENST00000449760 499 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.88□□□□□ -1.63
PTPN1P18031 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.88□□□□□ -1.63
PTPN1P18031 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.88□□□□□ -1.63
PTPN1P18031 snoU13.1-201ENST00000459157 104 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 RNU6-261P-201ENST00000459506 102 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 RN7SL860P-201ENST00000473738 223 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.88□□□□□ -1.63
PTPN1P18031 AC055855.1-201ENST00000489563 579 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC4.88□□□□□ -1.63
PTPN1P18031 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 RNU6-1220P-201ENST00000517126 108 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC4.88□□□□□ -1.63
PTPN1P18031 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.88□□□□□ -1.63
PTPN1P18031 SETP2-201ENST00000553886 926 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.88□□□□□ -1.63
PTPN1P18031 AL138976.2-201ENST00000563989 694 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC4.88□□□□□ -1.63
PTPN1P18031 AC055876.1-202ENST00000567053 138 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 AC018552.3-201ENST00000567416 561 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.88□□□□□ -1.63
PTPN1P18031 MIR3146-201ENST00000580367 79 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.88□□□□□ -1.63
PTPN1P18031 UBE2L4-201ENST00000587688 464 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 AC068790.4-201ENST00000602474 263 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 AC068790.3-201ENST00000602988 553 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.88□□□□□ -1.63
PTPN1P18031 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC4.88□□□□□ -1.63
PTPN1P18031 Z84480.1-201ENST00000605131 311 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 AC024940.5-201ENST00000622889 474 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 AL356585.4-201ENST00000623078 1229 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 AL158801.5-201ENST00000623123 465 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 AC138649.5-201ENST00000637456 137 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.88□□□□□ -1.63
PTPN1P18031 RPS4XP5-202ENST00000449995 1334 ntBASIC4.88□□□□□ -1.63
PTPN1P18031 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms