Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
MSH5O43196 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
MSH5O43196 RNU6-137P-201ENST00000363680 108 ntBASIC9.67□□□□□ -0.86
MSH5O43196 RN7SL849P-201ENST00000485236 295 ntBASIC9.67□□□□□ -0.86
MSH5O43196 CHCHD2P7-201ENST00000508008 452 ntBASIC9.67□□□□□ -0.86
MSH5O43196 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC9.67□□□□□ -0.86
MSH5O43196 AC090673.2-201ENST00000544279 454 ntTSL 3 BASIC9.67□□□□□ -0.86
MSH5O43196 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
MSH5O43196 MIR1273C-201ENST00000578669 77 ntBASIC9.67□□□□□ -0.86
MSH5O43196 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC9.67□□□□□ -0.86
MSH5O43196 AC234771.5-201ENST00000600161 514 ntBASIC9.67□□□□□ -0.86
MSH5O43196 MIR4275-201ENST00000636486 87 ntBASIC9.67□□□□□ -0.86
MSH5O43196 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
MSH5O43196 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC9.67□□□□□ -0.86
MSH5O43196 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
MSH5O43196 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
MSH5O43196 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
MSH5O43196 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
MSH5O43196 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
MSH5O43196 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
MSH5O43196 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
MSH5O43196 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC9.66□□□□□ -0.86
MSH5O43196 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
MSH5O43196 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
MSH5O43196 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
MSH5O43196 AL136100.1-201ENST00000407696 330 ntBASIC9.66□□□□□ -0.86
MSH5O43196 REREP2Y-201ENST00000439103 200 ntBASIC9.66□□□□□ -0.86
MSH5O43196 AC010618.1-201ENST00000469924 477 ntBASIC9.66□□□□□ -0.86
MSH5O43196 AC091874.1-201ENST00000511402 339 ntBASIC9.66□□□□□ -0.86
MSH5O43196 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
MSH5O43196 MIR4800-201ENST00000537353 80 ntBASIC9.66□□□□□ -0.86
MSH5O43196 AC013283.1-201ENST00000557282 492 ntBASIC9.66□□□□□ -0.86
MSH5O43196 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC9.66□□□□□ -0.86
MSH5O43196 COX6CP16-201ENST00000603667 216 ntBASIC9.66□□□□□ -0.86
MSH5O43196 TP53TG1_2.1-201ENST00000611226 182 ntBASIC9.66□□□□□ -0.86
MSH5O43196 METAP1-212ENST00000625963 147 ntTSL 5 BASIC9.66□□□□□ -0.86
MSH5O43196 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
MSH5O43196 LNX1-202ENST00000306888 3757 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
MSH5O43196 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
MSH5O43196 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
MSH5O43196 ADAMTS9-AS2-202ENST00000474768 2388 ntTSL 2 BASIC9.66□□□□□ -0.86
MSH5O43196 GJC1-202ENST00000426548 7640 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
MSH5O43196 AC005725.1-201ENST00000577346 2607 ntBASIC9.66□□□□□ -0.86
MSH5O43196 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
MSH5O43196 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
MSH5O43196 PIGN-233ENST00000639342 4305 ntTSL 5 BASIC9.65□□□□□ -0.86
MSH5O43196 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
MSH5O43196 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
MSH5O43196 AC126773.4-201ENST00000612545 3043 ntBASIC9.65□□□□□ -0.86
MSH5O43196 AC105046.1-201ENST00000566457 4997 ntBASIC9.65□□□□□ -0.86
MSH5O43196 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
MSH5O43196 ARHGAP20-205ENST00000529591 2623 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
MSH5O43196 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC9.65□□□□□ -0.86
MSH5O43196 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
MSH5O43196 RNU6-1229P-201ENST00000364295 107 ntBASIC9.65□□□□□ -0.86
MSH5O43196 AC134879.1-201ENST00000426062 394 ntBASIC9.65□□□□□ -0.86
MSH5O43196 RPEP4-201ENST00000437636 602 ntBASIC9.65□□□□□ -0.86
MSH5O43196 RPL23AP67-201ENST00000465341 474 ntBASIC9.65□□□□□ -0.86
MSH5O43196 RN7SL655P-201ENST00000486087 298 ntBASIC9.65□□□□□ -0.86
MSH5O43196 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC9.65□□□□□ -0.86
MSH5O43196 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC9.65□□□□□ -0.86
MSH5O43196 CUX2P1-201ENST00000606426 298 ntBASIC9.65□□□□□ -0.86
MSH5O43196 AL031777.2-201ENST00000611953 196 ntBASIC9.65□□□□□ -0.86
MSH5O43196 MIR6885-201ENST00000612241 66 ntBASIC9.65□□□□□ -0.86
MSH5O43196 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
MSH5O43196 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC9.65□□□□□ -0.86
MSH5O43196 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC9.65□□□□□ -0.86
MSH5O43196 SAMMSON-203ENST00000641005 2168 ntBASIC9.65□□□□□ -0.86
MSH5O43196 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
MSH5O43196 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.87
MSH5O43196 IL31RA-201ENST00000297015 2695 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
MSH5O43196 AC091544.5-201ENST00000620192 3815 ntBASIC9.65□□□□□ -0.87
MSH5O43196 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC9.65□□□□□ -0.87
MSH5O43196 DAZ2-202ENST00000382306 3781 ntAPPRIS ALT2 TSL 5 BASIC9.65□□□□□ -0.87
MSH5O43196 TP63-201ENST00000264731 4909 ntTSL 1 (best) BASIC9.65□□□□□ -0.87
MSH5O43196 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC9.65□□□□□ -0.87
MSH5O43196 LARS-212ENST00000510191 3737 ntTSL 2 BASIC9.65□□□□□ -0.87
MSH5O43196 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC9.64□□□□□ -0.87
MSH5O43196 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC9.64□□□□□ -0.87
MSH5O43196 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC9.64□□□□□ -0.87
MSH5O43196 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC9.64□□□□□ -0.87
MSH5O43196 AC009951.1-201ENST00000623674 2614 ntBASIC9.64□□□□□ -0.87
MSH5O43196 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC9.64□□□□□ -0.87
MSH5O43196 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC9.64□□□□□ -0.87
MSH5O43196 CNOT4-206ENST00000428680 4642 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
MSH5O43196 SNORA2C-201ENST00000408564 137 ntBASIC9.64□□□□□ -0.87
MSH5O43196 REG3G-203ENST00000409471 575 ntTSL 1 (best) BASIC9.64□□□□□ -0.87
MSH5O43196 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC9.64□□□□□ -0.87
MSH5O43196 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC9.64□□□□□ -0.87
MSH5O43196 RNU7-141P-201ENST00000459304 62 ntBASIC9.64□□□□□ -0.87
MSH5O43196 RPS16P9-201ENST00000477220 427 ntBASIC9.64□□□□□ -0.87
MSH5O43196 AC108471.1-201ENST00000513977 287 ntBASIC9.64□□□□□ -0.87
MSH5O43196 RNU6-365P-201ENST00000517113 106 ntBASIC9.64□□□□□ -0.87
MSH5O43196 MTND6P19-201ENST00000519399 524 ntBASIC9.64□□□□□ -0.87
MSH5O43196 RN7SL802P-201ENST00000577858 299 ntBASIC9.64□□□□□ -0.87
MSH5O43196 AC069061.2-201ENST00000580686 480 ntTSL 3 BASIC9.64□□□□□ -0.87
MSH5O43196 AC069307.1-201ENST00000602820 447 ntBASIC9.64□□□□□ -0.87
MSH5O43196 uc_338.21-201ENST00000622458 147 ntBASIC9.64□□□□□ -0.87
MSH5O43196 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC9.64□□□□□ -0.87
MSH5O43196 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC9.64□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms