Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
PCDHGB3Q9Y5G1 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 SNORA70.2-201ENST00000364506 135 ntBASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 RNU6-328P-201ENST00000390887 106 ntBASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 RN7SKP235-201ENST00000410662 305 ntBASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 SNORA74C-2-201ENST00000411179 201 ntBASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 HMGN1P24-201ENST00000412282 298 ntBASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 RPL36AP36-201ENST00000418616 301 ntBASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 C4BPAP2-201ENST00000428434 478 ntBASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 AL390023.1-201ENST00000428836 262 ntBASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 SKP1P1-201ENST00000438081 489 ntBASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 AL445567.1-201ENST00000439121 144 ntBASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 RPL7P36-201ENST00000444633 681 ntBASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 RAC1P7-201ENST00000445367 377 ntBASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 RPL23AP43-201ENST00000446445 471 ntBASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 MTND2P28-201ENST00000457540 1044 ntBASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 RPL23AP62-201ENST00000463396 453 ntBASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 RPL7P24-201ENST00000493052 752 ntBASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 IGKV2-23-201ENST00000518729 323 ntBASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 OR5M7P-201ENST00000526140 972 ntBASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 AP005205.1-201ENST00000563503 508 ntBASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 Z99497.2-201ENST00000603634 310 ntBASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 AP001330.4-201ENST00000604350 154 ntBASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 AC012360.2-201ENST00000609349 391 ntBASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 AL392048.1-201ENST00000613946 534 ntBASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 AC091931.1-201ENST00000623488 728 ntBASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 AC007546.2-201ENST00000623996 360 ntBASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 MIR3974-201ENST00000637126 96 ntBASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
PCDHGB3Q9Y5G1 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.15□□□□□ -1.74
PCDHGB3Q9Y5G1 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.15□□□□□ -1.74
PCDHGB3Q9Y5G1 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC4.15□□□□□ -1.74
PCDHGB3Q9Y5G1 DDX10P1-201ENST00000448545 1933 ntBASIC4.15□□□□□ -1.74
PCDHGB3Q9Y5G1 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PCDHGB3Q9Y5G1 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC4.15□□□□□ -1.74
PCDHGB3Q9Y5G1 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PCDHGB3Q9Y5G1 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.74
PCDHGB3Q9Y5G1 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
PCDHGB3Q9Y5G1 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 RNU5F-7P-201ENST00000363696 115 ntBASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 RNU6-114P-201ENST00000384704 105 ntBASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 U8.14-201ENST00000390843 143 ntBASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 RNU6-516P-201ENST00000411381 104 ntBASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 AC109780.2-201ENST00000413467 845 ntBASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 MTATP6P4-201ENST00000427725 675 ntBASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 SNRPFP4-201ENST00000456366 242 ntBASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 RNU7-170P-201ENST00000459303 61 ntBASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 RPL7P47-201ENST00000497299 556 ntBASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 DSTNP2-201ENST00000504533 515 ntBASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 RNU6-1003P-201ENST00000517099 105 ntBASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 RN7SKP289-201ENST00000517244 295 ntBASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 PHBP17-201ENST00000528576 541 ntBASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 AP001781.1-201ENST00000530977 207 ntBASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 MED28P6-201ENST00000558776 231 ntBASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 AC091489.2-201ENST00000566263 604 ntBASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 RPL23AP97-201ENST00000568955 471 ntBASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 AC091965.4-201ENST00000607691 587 ntBASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC4.15□□□□□ -1.75
PCDHGB3Q9Y5G1 MTND5P33-201ENST00000571250 1450 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms