Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 RNU4-42P-201ENST00000364738 142 ntBASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 RNU6-45P-201ENST00000384471 107 ntBASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 MIR143-201ENST00000385300 106 ntBASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 MIR548M-201ENST00000408260 86 ntBASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 GAS5-202ENST00000414075 413 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 AC092809.3-201ENST00000415453 231 ntBASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 SYF2P2-201ENST00000417620 583 ntBASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 AL590664.1-201ENST00000448065 339 ntBASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 RPL39P38-201ENST00000467018 153 ntBASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 AC087385.1-201ENST00000475062 312 ntBASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 AP000926.1-201ENST00000479573 241 ntBASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 AC124945.1-201ENST00000485133 188 ntBASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 RN7SL629P-201ENST00000489622 285 ntBASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 AC005798.1-201ENST00000513715 387 ntBASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 IGHVII-44-2-201ENST00000517728 250 ntBASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 CDH12P4-201ENST00000517835 295 ntBASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 CDH12P3-201ENST00000517935 295 ntBASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 CDH12P1-201ENST00000518435 295 ntBASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 AC090022.1-201ENST00000546569 311 ntBASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 AC119403.2-201ENST00000590960 598 ntBASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 AC012119.1-201ENST00000603184 222 ntBASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 AL355812.1-201ENST00000603215 216 ntBASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 AC011626.1-201ENST00000604710 562 ntBASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 ELOCP5-201ENST00000604924 333 ntBASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 NANOGP3-201ENST00000605855 286 ntBASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 AC002044.1-201ENST00000606707 158 ntBASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 U2.22-201ENST00000636441 106 ntBASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
PCDHB11Q9Y5F2 AL359893.1-201ENST00000447628 1580 ntBASIC5.84□□□□□ -1.48
PCDHB11Q9Y5F2 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
PCDHB11Q9Y5F2 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
PCDHB11Q9Y5F2 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.84□□□□□ -1.48
PCDHB11Q9Y5F2 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
PCDHB11Q9Y5F2 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 TTC41P-205ENST00000551270 3963 ntBASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 AL138820.1-201ENST00000617901 5305 ntBASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 SNORD1C-201ENST00000363315 78 ntBASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 RNU6-33P-201ENST00000384793 107 ntBASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 AP000580.1-201ENST00000404439 358 ntBASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 AL138885.1-201ENST00000405921 675 ntBASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 RNU2-50P-201ENST00000410494 143 ntBASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 ELOCP20-201ENST00000422460 345 ntBASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 CYCSP43-201ENST00000438233 310 ntBASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 NEFMP1-201ENST00000443423 1006 ntBASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 AC023141.9-201ENST00000458734 412 ntBASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 HMGB1P25-201ENST00000468402 607 ntBASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 RPL31P60-201ENST00000478450 367 ntBASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 RN7SL193P-201ENST00000491708 276 ntBASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 RPL7P23-201ENST00000493874 747 ntBASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 RNU6-677P-201ENST00000516914 101 ntBASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 IGKV2D-36-201ENST00000518643 226 ntBASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 IGLV2-28-201ENST00000520681 304 ntBASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 HSPE1P20-201ENST00000538133 289 ntBASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 AC067852.3-201ENST00000589177 561 ntBASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 AC093227.2-201ENST00000589357 285 ntBASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 MIR132-201ENST00000591554 101 ntBASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 COX6CP7-201ENST00000597056 208 ntBASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 AC104763.2-201ENST00000604179 382 ntBASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 RPL12P48-201ENST00000605620 304 ntBASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 AC007619.2-201ENST00000605743 379 ntBASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 AC096772.1-201ENST00000609146 564 ntBASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 AC009229.4-201ENST00000623854 1947 ntBASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
PCDHB11Q9Y5F2 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB11Q9Y5F2 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB11Q9Y5F2 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB11Q9Y5F2 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB11Q9Y5F2 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB11Q9Y5F2 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
PCDHB11Q9Y5F2 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms