Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 SNRPEP2-201ENST00000397592 279 ntBASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 RSL24D1P1-201ENST00000404972 493 ntBASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 RNU2-42P-201ENST00000410697 113 ntBASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 OR4K6P-201ENST00000416478 897 ntBASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 MTND2P5-201ENST00000432656 1006 ntBASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 AC092427.1-201ENST00000439177 601 ntBASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 Z99127.3-201ENST00000448158 395 ntBASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 AL133162.1-201ENST00000463228 453 ntBASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 AL049829.1-201ENST00000465411 156 ntBASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 ST13P14-201ENST00000474095 734 ntBASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 AC079203.1-201ENST00000487972 404 ntBASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 AC112206.4-201ENST00000515142 405 ntBASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 RNU6-1225P-201ENST00000516336 65 ntBASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 HIGD1AP17-201ENST00000554576 276 ntBASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 MED28P6-201ENST00000558776 231 ntBASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 MIR4637-201ENST00000582405 84 ntBASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 AC131902.3-201ENST00000611767 581 ntBASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 AF117829.1-206ENST00000621883 3802 ntBASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 MIR1322-201ENST00000638013 71 ntBASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.83□□□□□ -1.96
KCNIP3Q9Y2W7 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 SNORA70C-201ENST00000384538 135 ntBASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 SNORA40.2-201ENST00000390847 128 ntBASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 U3.42-201ENST00000408746 214 ntBASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 RNA5SP44-201ENST00000410446 133 ntBASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 AL161449.1-201ENST00000414531 1199 ntBASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 AL137014.1-201ENST00000420490 1226 ntBASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 MRPS36P1-201ENST00000421291 307 ntBASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 CST9LP2-201ENST00000437612 320 ntBASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 AC004866.2-201ENST00000438285 481 ntBASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 MTND2P20-201ENST00000440805 661 ntBASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 RPL17P49-201ENST00000443728 411 ntBASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 RPL7P19-201ENST00000469948 618 ntBASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 RN7SL132P-201ENST00000478131 296 ntBASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 AC231760.1-201ENST00000498002 260 ntBASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 COX7A2P2-201ENST00000505291 250 ntBASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 AC010460.1-201ENST00000507087 466 ntBASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 RNU6-352P-201ENST00000516908 107 ntBASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 HSPA8P13-201ENST00000523715 472 ntBASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 AC022690.1-201ENST00000526681 550 ntBASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 HSPE1P5-201ENST00000561489 272 ntBASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 AC053481.3-201ENST00000577881 843 ntBASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 AC069304.2-201ENST00000605154 435 ntBASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 AL591516.1-201ENST00000611326 274 ntBASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 AC068831.7-201ENST00000616954 363 ntBASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 AL354798.1-201ENST00000622505 329 ntBASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 AC004009.2-201ENST00000623016 728 ntBASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 AC084035.1-201ENST00000634543 607 ntBASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 LRRC77P-213ENST00000637727 880 ntBASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 AC090740.1-201ENST00000623193 2262 ntBASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 OR4G11P-202ENST00000642116 1414 ntBASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 CDR1-202ENST00000625883 1485 ntBASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
KCNIP3Q9Y2W7 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 RNU6-173P-201ENST00000364215 104 ntBASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 RPL7P60-201ENST00000397636 735 ntBASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 Z99755.1-201ENST00000414048 380 ntBASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 AL139281.1-201ENST00000422120 335 ntBASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 AC019178.2-201ENST00000423595 505 ntBASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 GAS5-208ENST00000425771 242 ntTSL 3 BASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 MUPP-201ENST00000438111 566 ntBASIC2.81□□□□□ -1.96
KCNIP3Q9Y2W7 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.81□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 97.7 ms