Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 EIF2AP4-201ENST00000424793 1781 ntBASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 PWAR1-201ENST00000624188 2414 ntBASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 RNU1-49P-201ENST00000363468 159 ntBASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 RNU6-280P-201ENST00000364145 104 ntBASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 RNU6-1078P-201ENST00000364522 103 ntBASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 RNA5SP156-201ENST00000410250 110 ntBASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 RNU6-1156P-201ENST00000410365 100 ntBASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 AMMECR1LP1-201ENST00000415152 841 ntBASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 PNKDP1-201ENST00000435914 430 ntBASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 RPS17P13-201ENST00000448974 407 ntBASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 AC092967.1-201ENST00000449016 481 ntBASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 AC098847.1-201ENST00000473094 348 ntBASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 AC084198.1-201ENST00000477747 402 ntBASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 AC092436.3-201ENST00000511788 257 ntBASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 RNU6-397P-201ENST00000516226 104 ntBASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 AC060775.1-201ENST00000518241 520 ntBASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 AP003733.2-201ENST00000529409 171 ntBASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 AL451044.1-201ENST00000604867 238 ntBASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 AC092266.1-201ENST00000610958 165 ntBASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 RN7SL261P-201ENST00000613441 282 ntBASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 AC130454.1-201ENST00000622948 401 ntBASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 AC020633.1-201ENST00000468439 2247 ntBASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
TIMMDC1Q9NPL8 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
TIMMDC1Q9NPL8 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
TIMMDC1Q9NPL8 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
TIMMDC1Q9NPL8 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
TIMMDC1Q9NPL8 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
TIMMDC1Q9NPL8 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
TIMMDC1Q9NPL8 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.49
TIMMDC1Q9NPL8 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
TIMMDC1Q9NPL8 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 RNU6-212P-201ENST00000362642 104 ntBASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 RN7SKP162-201ENST00000363605 345 ntBASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 RNY3P11-201ENST00000364153 102 ntBASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 SMIM11P1-201ENST00000369586 178 ntBASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 AL138885.1-201ENST00000405921 675 ntBASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 SNORA77.2-201ENST00000408571 112 ntBASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 MIR548H3-201ENST00000408771 118 ntBASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 RN7SKP159-201ENST00000410657 292 ntBASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 RNU2-71P-201ENST00000411395 189 ntBASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 HMGB3P24-201ENST00000433260 622 ntBASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 PPIAP7-201ENST00000454070 489 ntBASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 RNU7-187P-201ENST00000458985 68 ntBASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 RPS27AP1-201ENST00000475545 471 ntBASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 RN7SL432P-201ENST00000484057 298 ntBASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 RNU5B-3P-201ENST00000516601 115 ntBASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 RNU6-897P-201ENST00000517135 105 ntBASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 AP000620.1-201ENST00000527147 504 ntBASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 AC015720.2-201ENST00000567709 334 ntBASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 AC008507.3-201ENST00000585753 472 ntBASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 AL138895.2-201ENST00000603019 178 ntBASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 MIR1910-201ENST00000636955 80 ntBASIC5.71□□□□□ -1.5
TIMMDC1Q9NPL8 AC132825.6-201ENST00000638861 357 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms