Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC7.82□□□□□ -1.16
RNF39Q9H2S5 NCBP3-201ENST00000389005 12770 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
RNF39Q9H2S5 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC7.82□□□□□ -1.16
RNF39Q9H2S5 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC7.82□□□□□ -1.16
RNF39Q9H2S5 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RNF39Q9H2S5 AC010886.1-201ENST00000437380 2869 ntBASIC7.82□□□□□ -1.16
RNF39Q9H2S5 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
RNF39Q9H2S5 DDX24-209ENST00000621632 5612 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RNF39Q9H2S5 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
RNF39Q9H2S5 FBXW10-201ENST00000301938 3221 ntAPPRIS ALT2 TSL 1 (best) BASIC7.82□□□□□ -1.16
RNF39Q9H2S5 ZNF225-201ENST00000262894 4482 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RNF39Q9H2S5 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RNF39Q9H2S5 ZNF677-206ENST00000598513 3497 ntAPPRIS P1 TSL 1 (best) BASIC7.82□□□□□ -1.16
RNF39Q9H2S5 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC7.81□□□□□ -1.16
RNF39Q9H2S5 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC7.81□□□□□ -1.16
RNF39Q9H2S5 SCAND2P-201ENST00000348993 8975 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RNF39Q9H2S5 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC7.81□□□□□ -1.16
RNF39Q9H2S5 MAPK10-251ENST00000640858 3052 ntTSL 5 BASIC7.81□□□□□ -1.16
RNF39Q9H2S5 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC7.81□□□□□ -1.16
RNF39Q9H2S5 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC7.81□□□□□ -1.16
RNF39Q9H2S5 USPL1-201ENST00000255304 3814 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RNF39Q9H2S5 AC005300.1-201ENST00000428401 373 ntBASIC7.81□□□□□ -1.16
RNF39Q9H2S5 AC073900.1-201ENST00000429766 776 ntBASIC7.81□□□□□ -1.16
RNF39Q9H2S5 AC009244.1-201ENST00000450566 258 ntBASIC7.81□□□□□ -1.16
RNF39Q9H2S5 AC002368.1-201ENST00000456981 388 ntTSL 3 BASIC7.81□□□□□ -1.16
RNF39Q9H2S5 AC005912.1-201ENST00000495392 255 ntBASIC7.81□□□□□ -1.16
RNF39Q9H2S5 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC7.81□□□□□ -1.16
RNF39Q9H2S5 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RNF39Q9H2S5 EEF1B2P1-201ENST00000567221 672 ntBASIC7.81□□□□□ -1.16
RNF39Q9H2S5 MIR5682-201ENST00000584864 76 ntBASIC7.81□□□□□ -1.16
RNF39Q9H2S5 AC087894.3-201ENST00000623682 349 ntBASIC7.81□□□□□ -1.16
RNF39Q9H2S5 AC112484.5-201ENST00000624189 228 ntBASIC7.81□□□□□ -1.16
RNF39Q9H2S5 SCARNA4-202ENST00000625402 129 ntBASIC7.81□□□□□ -1.16
RNF39Q9H2S5 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC7.81□□□□□ -1.16
RNF39Q9H2S5 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC7.81□□□□□ -1.16
RNF39Q9H2S5 MYO6-208ENST00000627432 4074 ntTSL 5 BASIC7.81□□□□□ -1.16
RNF39Q9H2S5 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.81□□□□□ -1.16
RNF39Q9H2S5 TSHR-201ENST00000298171 4400 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RNF39Q9H2S5 CDKL5-201ENST00000379989 3463 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RNF39Q9H2S5 NLRP9P1-201ENST00000540920 2655 ntBASIC7.81□□□□□ -1.16
RNF39Q9H2S5 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC7.81□□□□□ -1.16
RNF39Q9H2S5 NDUFA4-201ENST00000339600 2130 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RNF39Q9H2S5 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.81□□□□□ -1.16
RNF39Q9H2S5 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC7.81□□□□□ -1.16
RNF39Q9H2S5 SLC23A2-202ENST00000379333 6962 ntAPPRIS P1 TSL 1 (best) BASIC7.81□□□□□ -1.16
RNF39Q9H2S5 MAPK10-392ENST00000642103 3126 ntAPPRIS P2 BASIC7.81□□□□□ -1.16
RNF39Q9H2S5 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC7.8□□□□□ -1.16
RNF39Q9H2S5 DNM1L-202ENST00000358214 3229 ntTSL 5 BASIC7.8□□□□□ -1.16
RNF39Q9H2S5 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.8□□□□□ -1.16
RNF39Q9H2S5 AC006058.1-201ENST00000568686 5067 ntBASIC7.8□□□□□ -1.16
RNF39Q9H2S5 AC007938.1-201ENST00000562524 2902 ntBASIC7.8□□□□□ -1.16
RNF39Q9H2S5 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC7.8□□□□□ -1.16
RNF39Q9H2S5 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RNF39Q9H2S5 OR51A10P-201ENST00000307165 937 ntBASIC7.8□□□□□ -1.16
RNF39Q9H2S5 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
RNF39Q9H2S5 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC7.8□□□□□ -1.16
RNF39Q9H2S5 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC7.8□□□□□ -1.16
RNF39Q9H2S5 FTH1P20-201ENST00000434913 548 ntBASIC7.8□□□□□ -1.16
RNF39Q9H2S5 GAPDHP53-201ENST00000458397 924 ntBASIC7.8□□□□□ -1.16
RNF39Q9H2S5 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC7.8□□□□□ -1.16
RNF39Q9H2S5 RNU2-11P-201ENST00000459191 187 ntBASIC7.8□□□□□ -1.16
RNF39Q9H2S5 AC096922.1-201ENST00000461635 651 ntBASIC7.8□□□□□ -1.16
RNF39Q9H2S5 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC7.8□□□□□ -1.16
RNF39Q9H2S5 RNU6-795P-201ENST00000516323 103 ntBASIC7.8□□□□□ -1.16
RNF39Q9H2S5 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RNF39Q9H2S5 AC091078.2-201ENST00000557145 559 ntBASIC7.8□□□□□ -1.16
RNF39Q9H2S5 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC7.8□□□□□ -1.16
RNF39Q9H2S5 AL356157.2-201ENST00000605122 111 ntBASIC7.8□□□□□ -1.16
RNF39Q9H2S5 YPEL5P2-201ENST00000605553 359 ntBASIC7.8□□□□□ -1.16
RNF39Q9H2S5 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
RNF39Q9H2S5 AC012531.4-201ENST00000616509 177 ntBASIC7.8□□□□□ -1.16
RNF39Q9H2S5 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC7.8□□□□□ -1.16
RNF39Q9H2S5 AC007546.2-201ENST00000623996 360 ntBASIC7.8□□□□□ -1.16
RNF39Q9H2S5 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC7.8□□□□□ -1.16
RNF39Q9H2S5 GTF2H3-212ENST00000543341 3329 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RNF39Q9H2S5 KIF11-201ENST00000260731 4860 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RNF39Q9H2S5 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RNF39Q9H2S5 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RNF39Q9H2S5 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RNF39Q9H2S5 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC7.8□□□□□ -1.16
RNF39Q9H2S5 AC008555.1-201ENST00000561778 2757 ntBASIC7.8□□□□□ -1.16
RNF39Q9H2S5 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RNF39Q9H2S5 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC7.8□□□□□ -1.16
RNF39Q9H2S5 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC7.8□□□□□ -1.16
RNF39Q9H2S5 ALB-202ENST00000401494 1659 ntTSL 5 BASIC7.79□□□□□ -1.16
RNF39Q9H2S5 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF39Q9H2S5 DCX-205ENST00000488120 2476 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF39Q9H2S5 ADAM24P-201ENST00000398655 2101 ntBASIC7.79□□□□□ -1.16
RNF39Q9H2S5 FOXJ3-205ENST00000372573 5309 ntAPPRIS P3 TSL 2 BASIC7.79□□□□□ -1.16
RNF39Q9H2S5 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC7.79□□□□□ -1.16
RNF39Q9H2S5 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RNF39Q9H2S5 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF39Q9H2S5 SORBS1-204ENST00000361941 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF39Q9H2S5 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC7.79□□□□□ -1.16
RNF39Q9H2S5 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC7.79□□□□□ -1.16
RNF39Q9H2S5 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC7.79□□□□□ -1.16
RNF39Q9H2S5 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.79□□□□□ -1.16
RNF39Q9H2S5 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC7.79□□□□□ -1.16
RNF39Q9H2S5 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
RNF39Q9H2S5 Y_RNA.91-201ENST00000363042 107 ntBASIC7.79□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms