Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 RNU1-30P-201ENST00000606575 163 ntBASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 CR769775.3-201ENST00000610388 219 ntBASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 CDK2AP2P1-201ENST00000617479 328 ntBASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 MIR7978-201ENST00000636158 59 ntBASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 FAM166B-207ENST00000639789 651 ntTSL 2 BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 NLRP5-201ENST00000390649 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 NLRP5-203ENST00000621651 3885 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 ERMAP-201ENST00000328249 3949 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 CACNA1D-219ENST00000636938 6868 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 RTN4-206ENST00000394611 4161 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 ZNF469-202ENST00000565624 13279 ntAPPRIS ALT2 BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 SCAF11-202ENST00000369367 7543 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 TRPM3-203ENST00000358082 4710 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 TRPM3-214ENST00000396292 4740 ntAPPRIS P4 TSL 5 BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 SLC12A1-203ENST00000396577 4708 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 TRPM3-215ENST00000408909 4701 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 NOTCH2-201ENST00000256646 11389 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 ARHGAP19-201ENST00000358308 5390 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
KRTAP3-3Q9BYR6 GJB2-201ENST00000382844 2309 ntAPPRIS P1 BASIC4.34□□□□□ -1.72
KRTAP3-3Q9BYR6 TRERF1-204ENST00000372922 7286 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
KRTAP3-3Q9BYR6 ZNF507-201ENST00000311921 7638 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
KRTAP3-3Q9BYR6 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
KRTAP3-3Q9BYR6 THADA-205ENST00000404790 3043 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
KRTAP3-3Q9BYR6 TENM2-205ENST00000519204 9427 ntTSL 5 BASIC4.34□□□□□ -1.72
KRTAP3-3Q9BYR6 ZNF268-206ENST00000536899 3236 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
KRTAP3-3Q9BYR6 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
KRTAP3-3Q9BYR6 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC4.34□□□□□ -1.72
KRTAP3-3Q9BYR6 PTP4A2-218ENST00000602725 3353 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
KRTAP3-3Q9BYR6 SCARB2-211ENST00000638603 4284 ntTSL 5 BASIC4.34□□□□□ -1.72
KRTAP3-3Q9BYR6 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
KRTAP3-3Q9BYR6 GAB3-202ENST00000369575 4718 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.72
KRTAP3-3Q9BYR6 TRPM3-213ENST00000396285 4701 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
KRTAP3-3Q9BYR6 PIGN-251ENST00000640876 6045 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
KRTAP3-3Q9BYR6 MMAA-201ENST00000281317 7068 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
KRTAP3-3Q9BYR6 GRB10-204ENST00000398812 4705 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 CCDC144B-201ENST00000285176 4310 ntBASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 ZNF185-204ENST00000370268 4305 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 TSHZ2-203ENST00000603338 3803 ntTSL 2 BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 MRPL22-201ENST00000265229 3035 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 CCPG1-212ENST00000569205 2970 ntTSL 2 BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 CR786580.1-201ENST00000417843 2878 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 DDHD1-210ENST00000612692 12339 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 FP325330.3-201ENST00000623760 9537 ntBASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 APBB2-201ENST00000295974 8972 ntAPPRIS ALT1 TSL 2 BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 AC006030.1-201ENST00000451608 5059 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 TYW5-201ENST00000354611 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 EPN2-204ENST00000395620 3860 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 RNA5SP46-201ENST00000362370 120 ntBASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 RNU1-136P-201ENST00000384181 164 ntBASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 LINC00222-203ENST00000416890 602 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 ZNF70P1-201ENST00000417480 624 ntBASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 SEMA3B-AS1-201ENST00000421735 338 ntTSL 2 BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 AL109659.1-201ENST00000431986 651 ntTSL 3 BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 AC008267.4-201ENST00000442005 521 ntBASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 SNRPGP5-201ENST00000456003 220 ntBASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 RN7SL706P-201ENST00000460079 292 ntBASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 RN7SL566P-201ENST00000467650 296 ntBASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 RN7SL496P-201ENST00000470372 290 ntBASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 RN7SL370P-201ENST00000470869 295 ntBASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 RN7SL400P-201ENST00000473634 296 ntBASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 RN7SL584P-201ENST00000492309 297 ntBASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 AC146949.1-201ENST00000505946 423 ntBASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 AC146944.1-201ENST00000508439 418 ntBASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 AC093878.1-201ENST00000515630 432 ntBASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 RPPH1-2P-201ENST00000516688 293 ntBASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 AC123788.1-201ENST00000526922 783 ntTSL 3 BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 AC037198.1-201ENST00000560769 281 ntTSL 3 BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 AC104984.4-201ENST00000577420 224 ntTSL 3 BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 AL590705.1-201ENST00000607322 484 ntTSL 4 BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 RN7SL796P-201ENST00000613991 291 ntBASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 ARHGEF7-203ENST00000375723 4957 ntTSL 5 BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 FMN2-206ENST00000543681 2902 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 MAATS1-201ENST00000273390 4433 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 GIGYF2-204ENST00000409480 5976 ntTSL 5 BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 AC002546.1-201ENST00000588041 2504 ntBASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 GIGYF2-202ENST00000409196 5747 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 FAM168A-201ENST00000064778 7296 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 JADE1-202ENST00000413543 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 ANKFN1-202ENST00000566473 3840 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 CMKLR1-202ENST00000412676 5110 ntAPPRIS ALT2 TSL 3 BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 KLHL32-205ENST00000539200 3600 ntTSL 2 BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 MIPOL1-202ENST00000396294 6258 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 MIER1-201ENST00000355356 4818 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
KRTAP3-3Q9BYR6 SAR1A-202ENST00000373238 3227 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 89.5 ms