Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 ACVR2B-201ENST00000352511 11821 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 WDR87-201ENST00000303868 8847 ntAPPRIS P3 TSL 2 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 RNU6-662P-201ENST00000384253 104 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 RNU6-505P-201ENST00000384427 107 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 RNU6-1168P-201ENST00000390831 104 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AL121977.1-201ENST00000401636 979 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 HMGB1P17-201ENST00000403495 628 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AL355615.1-201ENST00000406187 641 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 RNU6ATAC-201ENST00000408749 126 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 Y_RNA.615-201ENST00000410769 117 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 RPS12P24-201ENST00000412619 387 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 MTND6P18-201ENST00000439477 513 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AL354714.3-201ENST00000447284 493 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AC098826.2-201ENST00000452011 651 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 CACYBPP2-201ENST00000453625 678 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 ADGRL3-204ENST00000506720 4962 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AC111000.2-201ENST00000507775 550 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AC104057.1-201ENST00000515547 497 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 RNU2-44P-201ENST00000516795 194 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AC084364.2-201ENST00000546924 395 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 RRN3P3-201ENST00000549207 578 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 WDR61-205ENST00000558459 884 ntTSL 3 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 MIR4789-201ENST00000577469 82 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AC113195.1-201ENST00000579952 141 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AL031274.2-201ENST00000599419 203 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AC010200.2-201ENST00000605098 235 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AC113194.1-201ENST00000606037 500 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AC008966.2-201ENST00000606157 453 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 REV3L-202ENST00000368802 10701 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 SMG1P4-204ENST00000523028 4131 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 PRKG1-204ENST00000373985 6487 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 GLS-204ENST00000409428 816 ntTSL 2 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 RN7SKP33-201ENST00000410942 340 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 RFESDP1-201ENST00000422350 461 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AC011998.1-201ENST00000433403 117 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AL731534.1-201ENST00000434711 269 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AC097499.1-201ENST00000444277 208 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 SSXP1-201ENST00000453640 473 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 RPL39P39-201ENST00000455840 151 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 RPL36AP41-201ENST00000493820 306 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 SEPT10P1-201ENST00000517342 1162 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 HIGD1AP6-201ENST00000521833 279 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 COX6B1P6-201ENST00000522347 255 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AP003181.2-201ENST00000528941 181 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AL589994.2-201ENST00000621124 579 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 ADAM10-201ENST00000260408 11431 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 SOX6-202ENST00000396356 8865 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 SCN4A-201ENST00000435607 7805 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 EEA1-201ENST00000322349 9875 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 FXR1-202ENST00000357559 8711 ntAPPRIS P3 TSL 1 (best) BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 SVIL-202ENST00000375398 8201 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AC092268.1-201ENST00000342691 405 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 Y_RNA.132-201ENST00000363421 102 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 RNU6-331P-201ENST00000384724 107 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 RPA3-203ENST00000401447 414 ntTSL 3 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AL031779.1-201ENST00000415663 330 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 HLA-N-201ENST00000437516 135 ntBASIC1.5□□□□□ -2.17
HMCN1Q96RW7 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.5□□□□□ -2.17
HMCN1Q96RW7 RPS7P6-201ENST00000485777 579 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms