Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 RNA5SP453-201ENST00000362503 119 ntBASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 RNY3P11-201ENST00000364153 102 ntBASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 RNU6-398P-201ENST00000384143 109 ntBASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 RNU6-1226P-201ENST00000384317 107 ntBASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 Y_RNA.577-201ENST00000384794 101 ntBASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 SAR1AP2-201ENST00000392696 594 ntBASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 RNU6-1156P-201ENST00000410365 100 ntBASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 RPL7P2-201ENST00000427639 268 ntBASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 AC005094.1-201ENST00000440420 368 ntBASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 RPL36AP13-201ENST00000457490 317 ntBASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 RNU1-88P-201ENST00000459274 128 ntBASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 AC006539.1-201ENST00000481419 501 ntBASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 SNORD46.2-201ENST00000516021 102 ntBASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 HMGN2P36-201ENST00000529541 409 ntBASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 AC109446.1-201ENST00000566172 220 ntBASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 MIR4504-201ENST00000577413 92 ntBASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 COX6CP7-201ENST00000597056 208 ntBASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 AC006557.5-201ENST00000603126 811 ntBASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 AC127024.6-201ENST00000621598 424 ntBASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 AP002512.4-202ENST00000641599 4530 ntBASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 ADAM24P-201ENST00000398655 2101 ntBASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 AC016745.2-201ENST00000608834 3443 ntBASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
LYSMD3Q7Z3D4 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 Z95114.1-201ENST00000624264 14574 ntBASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 OR52B3P-201ENST00000314715 928 ntBASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 RNU6-545P-201ENST00000362681 104 ntBASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 RN7SKP95-201ENST00000362860 303 ntBASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 RNU6-214P-201ENST00000384130 107 ntBASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 RNU6-434P-201ENST00000384376 107 ntBASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 RNA5SP284-201ENST00000384547 118 ntBASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 AL138885.1-201ENST00000405921 675 ntBASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 RNA5SP178-201ENST00000410380 128 ntBASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 AC234781.4-201ENST00000419384 244 ntBASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 MYL8P-204ENST00000431574 518 ntBASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 AC004383.1-201ENST00000438135 289 ntBASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 NDUFB1P2-201ENST00000449477 176 ntBASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 AP006222.1-205ENST00000450734 457 ntBASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 AL353691.1-201ENST00000451332 387 ntBASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 OR2AQ1P-201ENST00000451972 200 ntBASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 LINC01399-202ENST00000458450 244 ntBASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 AC005912.1-201ENST00000495392 255 ntBASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 AC025423.5-201ENST00000550230 219 ntBASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 RPL23AP84-201ENST00000571193 464 ntBASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 AC006600.1-201ENST00000572529 153 ntBASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 AL118522.2-201ENST00000616045 615 ntBASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 AP005431.1-201ENST00000618479 319 ntBASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
LYSMD3Q7Z3D4 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms