Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC012603.1-201ENST00000606424 528 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 AC093838.1-201ENST00000613014 469 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 AC015967.1-201ENST00000619893 476 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 AC068870.2-201ENST00000620635 389 ntBASIC4.33□□□□□ -1.72
RNF220Q5VTB9 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.33□□□□□ -1.72
RNF220Q5VTB9 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF220Q5VTB9 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF220Q5VTB9 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF220Q5VTB9 AC109780.1-201ENST00000451768 1344 ntBASIC4.32□□□□□ -1.72
RNF220Q5VTB9 RNU1-82P-201ENST00000390851 165 ntBASIC4.32□□□□□ -1.72
RNF220Q5VTB9 RNU6-882P-201ENST00000391025 103 ntBASIC4.32□□□□□ -1.72
RNF220Q5VTB9 RPL23AP32-201ENST00000395315 459 ntBASIC4.32□□□□□ -1.72
RNF220Q5VTB9 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF220Q5VTB9 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF220Q5VTB9 AL591848.1-201ENST00000413092 322 ntBASIC4.32□□□□□ -1.72
RNF220Q5VTB9 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC4.32□□□□□ -1.72
RNF220Q5VTB9 SSXP9-201ENST00000417503 292 ntBASIC4.32□□□□□ -1.72
RNF220Q5VTB9 TOMM22P1-201ENST00000418578 312 ntBASIC4.32□□□□□ -1.72
RNF220Q5VTB9 AC119618.1-201ENST00000434191 222 ntBASIC4.32□□□□□ -1.72
RNF220Q5VTB9 RPL21P112-201ENST00000434403 463 ntBASIC4.32□□□□□ -1.72
RNF220Q5VTB9 CBX1P1-201ENST00000440184 427 ntBASIC4.32□□□□□ -1.72
RNF220Q5VTB9 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.32□□□□□ -1.72
RNF220Q5VTB9 NPM1P49-201ENST00000448027 714 ntBASIC4.32□□□□□ -1.72
RNF220Q5VTB9 RPS24P6-201ENST00000452670 400 ntBASIC4.32□□□□□ -1.72
RNF220Q5VTB9 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF220Q5VTB9 snoU13.20-201ENST00000459180 104 ntBASIC4.32□□□□□ -1.72
RNF220Q5VTB9 AC018638.3-201ENST00000461273 132 ntBASIC4.32□□□□□ -1.72
RNF220Q5VTB9 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF220Q5VTB9 AC135721.1-201ENST00000497954 479 ntBASIC4.32□□□□□ -1.72
RNF220Q5VTB9 AC078918.1-201ENST00000498515 228 ntBASIC4.32□□□□□ -1.72
RNF220Q5VTB9 AC020893.1-201ENST00000502452 580 ntBASIC4.32□□□□□ -1.72
RNF220Q5VTB9 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC4.32□□□□□ -1.72
RNF220Q5VTB9 AC083829.1-201ENST00000503756 657 ntBASIC4.32□□□□□ -1.72
RNF220Q5VTB9 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF220Q5VTB9 AC010587.1-201ENST00000505809 469 ntBASIC4.32□□□□□ -1.72
RNF220Q5VTB9 SUB1-206ENST00000506237 908 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
RNF220Q5VTB9 RPL37P25-201ENST00000507308 276 ntBASIC4.32□□□□□ -1.72
RNF220Q5VTB9 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.32□□□□□ -1.72
RNF220Q5VTB9 AC026801.2-201ENST00000515352 425 ntBASIC4.32□□□□□ -1.72
RNF220Q5VTB9 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC4.32□□□□□ -1.72
RNF220Q5VTB9 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF220Q5VTB9 AC021006.3-201ENST00000530771 192 ntBASIC4.32□□□□□ -1.72
RNF220Q5VTB9 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF220Q5VTB9 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.32□□□□□ -1.72
RNF220Q5VTB9 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.32□□□□□ -1.72
RNF220Q5VTB9 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.32□□□□□ -1.72
RNF220Q5VTB9 BNIP3P5-201ENST00000562290 498 ntBASIC4.32□□□□□ -1.72
RNF220Q5VTB9 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.32□□□□□ -1.72
RNF220Q5VTB9 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF220Q5VTB9 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF220Q5VTB9 OR7E18P-201ENST00000592589 702 ntBASIC4.32□□□□□ -1.72
RNF220Q5VTB9 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.32□□□□□ -1.72
RNF220Q5VTB9 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.32□□□□□ -1.72
RNF220Q5VTB9 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.32□□□□□ -1.72
RNF220Q5VTB9 AL161729.4-201ENST00000604650 476 ntBASIC4.32□□□□□ -1.72
RNF220Q5VTB9 AC008966.2-201ENST00000606157 453 ntBASIC4.32□□□□□ -1.72
RNF220Q5VTB9 AC245517.5-201ENST00000611529 162 ntBASIC4.32□□□□□ -1.72
RNF220Q5VTB9 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
RNF220Q5VTB9 AL353748.2-201ENST00000622148 471 ntBASIC4.32□□□□□ -1.72
RNF220Q5VTB9 AC138649.5-201ENST00000637456 137 ntBASIC4.32□□□□□ -1.72
RNF220Q5VTB9 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.32□□□□□ -1.72
RNF220Q5VTB9 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.32□□□□□ -1.72
RNF220Q5VTB9 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.32□□□□□ -1.72
RNF220Q5VTB9 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC4.32□□□□□ -1.72
RNF220Q5VTB9 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC4.32□□□□□ -1.72
RNF220Q5VTB9 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
RNF220Q5VTB9 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF220Q5VTB9 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.31□□□□□ -1.72
RNF220Q5VTB9 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
RNF220Q5VTB9 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF220Q5VTB9 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RNF220Q5VTB9 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.31□□□□□ -1.72
RNF220Q5VTB9 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RNF220Q5VTB9 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RNF220Q5VTB9 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.31□□□□□ -1.72
RNF220Q5VTB9 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
RNF220Q5VTB9 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RNF220Q5VTB9 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RNF220Q5VTB9 Y_RNA.3-201ENST00000362331 103 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 RNU6-223P-201ENST00000362830 107 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 SNORA7.2-201ENST00000364446 145 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 RNY4P16-201ENST00000364768 94 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 RNA5SP167-201ENST00000365461 116 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 RPS3AP36-201ENST00000398190 775 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 RPA3-203ENST00000401447 414 ntTSL 3 BASIC4.31□□□□□ -1.72
RNF220Q5VTB9 MIR1178-201ENST00000408396 91 ntBASIC4.31□□□□□ -1.72
RNF220Q5VTB9 RNU4-65P-201ENST00000410473 140 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 184.3 ms