Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC092628.2-201ENST00000622492 339 ntBASIC2.3□□□□□ -2.04
HTTP42858 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
HTTP42858 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
HTTP42858 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HTTP42858 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
HTTP42858 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
HTTP42858 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.3□□□□□ -2.04
HTTP42858 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.3□□□□□ -2.04
HTTP42858 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.3□□□□□ -2.04
HTTP42858 AP000942.1-201ENST00000463969 747 ntBASIC2.3□□□□□ -2.04
HTTP42858 AC105918.1-201ENST00000474399 838 ntBASIC2.3□□□□□ -2.04
HTTP42858 AC055876.1-202ENST00000567053 138 ntBASIC2.3□□□□□ -2.04
HTTP42858 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
HTTP42858 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.29□□□□□ -2.04
HTTP42858 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.29□□□□□ -2.04
HTTP42858 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.29□□□□□ -2.04
HTTP42858 TMEM248P1-201ENST00000510579 951 ntBASIC2.29□□□□□ -2.04
HTTP42858 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC2.29□□□□□ -2.04
HTTP42858 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC2.29□□□□□ -2.04
HTTP42858 AC092650.2-201ENST00000619984 902 ntBASIC2.29□□□□□ -2.04
HTTP42858 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.29□□□□□ -2.04
HTTP42858 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.29□□□□□ -2.04
HTTP42858 RNU2-68P-201ENST00000410878 191 ntBASIC2.29□□□□□ -2.04
HTTP42858 AC004965.1-201ENST00000413033 213 ntBASIC2.29□□□□□ -2.04
HTTP42858 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.29□□□□□ -2.04
HTTP42858 RAC1P5-201ENST00000512182 576 ntBASIC2.29□□□□□ -2.04
HTTP42858 RNU6-1231P-201ENST00000517185 103 ntBASIC2.29□□□□□ -2.04
HTTP42858 SNRPGP19-201ENST00000603826 189 ntBASIC2.29□□□□□ -2.04
HTTP42858 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC2.29□□□□□ -2.04
HTTP42858 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
HTTP42858 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
HTTP42858 Y_RNA.224-201ENST00000364308 111 ntBASIC2.28□□□□□ -2.04
HTTP42858 SDCBPP3-201ENST00000419629 891 ntBASIC2.28□□□□□ -2.04
HTTP42858 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.28□□□□□ -2.04
HTTP42858 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC2.28□□□□□ -2.04
HTTP42858 WDR61-205ENST00000558459 884 ntTSL 3 BASIC2.28□□□□□ -2.04
HTTP42858 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.28□□□□□ -2.04
HTTP42858 AL139811.1-201ENST00000424779 2299 ntBASIC2.28□□□□□ -2.04
HTTP42858 AC090229.1-201ENST00000590983 1609 ntBASIC2.28□□□□□ -2.04
HTTP42858 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC2.28□□□□□ -2.04
HTTP42858 OR5D17P-201ENST00000531492 978 ntBASIC2.28□□□□□ -2.04
HTTP42858 LINC00901.1-201ENST00000617252 152 ntBASIC2.28□□□□□ -2.04
HTTP42858 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
HTTP42858 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
HTTP42858 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC2.28□□□□□ -2.04
HTTP42858 RNU7-95P-201ENST00000459222 64 ntBASIC2.28□□□□□ -2.04
HTTP42858 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC2.28□□□□□ -2.04
HTTP42858 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC2.27□□□□□ -2.05
HTTP42858 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
HTTP42858 RNU6-707P-201ENST00000364647 95 ntBASIC2.27□□□□□ -2.05
HTTP42858 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HTTP42858 OR4R2P-201ENST00000530815 597 ntBASIC2.27□□□□□ -2.05
HTTP42858 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.27□□□□□ -2.05
HTTP42858 AL158196.1-201ENST00000616786 434 ntBASIC2.27□□□□□ -2.05
HTTP42858 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC2.27□□□□□ -2.05
HTTP42858 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC2.27□□□□□ -2.05
HTTP42858 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
HTTP42858 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HTTP42858 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
HTTP42858 AC009238.1-201ENST00000442165 424 ntBASIC2.27□□□□□ -2.05
HTTP42858 AC009237.6-201ENST00000446969 424 ntBASIC2.27□□□□□ -2.05
HTTP42858 RPS29P12-201ENST00000460178 152 ntBASIC2.27□□□□□ -2.05
HTTP42858 RNA5SP380-201ENST00000517190 98 ntBASIC2.27□□□□□ -2.05
HTTP42858 LINC00216-201ENST00000623548 1126 ntBASIC2.27□□□□□ -2.05
HTTP42858 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC2.27□□□□□ -2.05
HTTP42858 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
HTTP42858 MIR142-201ENST00000384835 87 ntBASIC2.26□□□□□ -2.05
HTTP42858 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.26□□□□□ -2.05
HTTP42858 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC2.26□□□□□ -2.05
HTTP42858 RPL21P134-201ENST00000453468 483 ntBASIC2.26□□□□□ -2.05
HTTP42858 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.26□□□□□ -2.05
HTTP42858 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.26□□□□□ -2.05
HTTP42858 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.26□□□□□ -2.05
HTTP42858 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.26□□□□□ -2.05
HTTP42858 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HTTP42858 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HTTP42858 AC011978.2-201ENST00000569835 2054 ntBASIC2.26□□□□□ -2.05
HTTP42858 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
HTTP42858 MTND5P23-201ENST00000430812 1655 ntBASIC2.26□□□□□ -2.05
HTTP42858 LTV1P1-201ENST00000510683 1237 ntBASIC2.26□□□□□ -2.05
HTTP42858 AC005296.1-201ENST00000616145 209 ntBASIC2.26□□□□□ -2.05
HTTP42858 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.26□□□□□ -2.05
HTTP42858 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC2.26□□□□□ -2.05
HTTP42858 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
HTTP42858 SNORD21-201ENST00000383953 95 ntBASIC2.26□□□□□ -2.05
HTTP42858 RNU2-6P-201ENST00000411404 190 ntBASIC2.26□□□□□ -2.05
HTTP42858 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.26□□□□□ -2.05
HTTP42858 AC140059.1-201ENST00000489238 361 ntBASIC2.26□□□□□ -2.05
HTTP42858 HIGD1AP10-201ENST00000527837 282 ntBASIC2.26□□□□□ -2.05
HTTP42858 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.26□□□□□ -2.05
HTTP42858 CYP3A51P-201ENST00000633513 256 ntBASIC2.26□□□□□ -2.05
HTTP42858 AC009501.3-201ENST00000605001 1352 ntBASIC2.25□□□□□ -2.05
HTTP42858 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.25□□□□□ -2.05
HTTP42858 RPL36AP33-201ENST00000450395 310 ntBASIC2.25□□□□□ -2.05
HTTP42858 AL121877.1-201ENST00000453704 622 ntBASIC2.25□□□□□ -2.05
HTTP42858 HMGB1P41-201ENST00000520234 440 ntBASIC2.25□□□□□ -2.05
HTTP42858 DNAJC19P9-201ENST00000555084 351 ntBASIC2.25□□□□□ -2.05
HTTP42858 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC2.25□□□□□ -2.05
HTTP42858 AC010872.1-201ENST00000624225 675 ntBASIC2.25□□□□□ -2.05
HTTP42858 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms