Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
USP17L3A6NCW0 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC6.23□□□□□ -1.41
USP17L3A6NCW0 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
USP17L3A6NCW0 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
USP17L3A6NCW0 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
USP17L3A6NCW0 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
USP17L3A6NCW0 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
USP17L3A6NCW0 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC6.22□□□□□ -1.41
USP17L3A6NCW0 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.22□□□□□ -1.41
USP17L3A6NCW0 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
USP17L3A6NCW0 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC6.22□□□□□ -1.41
USP17L3A6NCW0 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
USP17L3A6NCW0 IQCB2P-201ENST00000401788 1633 ntBASIC6.22□□□□□ -1.41
USP17L3A6NCW0 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC6.22□□□□□ -1.41
USP17L3A6NCW0 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
USP17L3A6NCW0 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
USP17L3A6NCW0 RNU6-1287P-201ENST00000362914 107 ntBASIC6.22□□□□□ -1.41
USP17L3A6NCW0 Y_RNA.167-201ENST00000363735 109 ntBASIC6.22□□□□□ -1.41
USP17L3A6NCW0 RNU1-32P-201ENST00000363937 159 ntBASIC6.22□□□□□ -1.41
USP17L3A6NCW0 RNU6-1060P-201ENST00000384664 107 ntBASIC6.22□□□□□ -1.41
USP17L3A6NCW0 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
USP17L3A6NCW0 RNU6-387P-201ENST00000411331 105 ntBASIC6.22□□□□□ -1.41
USP17L3A6NCW0 RNA5SP107-201ENST00000411358 122 ntBASIC6.22□□□□□ -1.41
USP17L3A6NCW0 AC009302.1-201ENST00000417147 390 ntBASIC6.22□□□□□ -1.41
USP17L3A6NCW0 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC6.22□□□□□ -1.41
USP17L3A6NCW0 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC6.22□□□□□ -1.41
USP17L3A6NCW0 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC6.22□□□□□ -1.41
USP17L3A6NCW0 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.22□□□□□ -1.41
USP17L3A6NCW0 AC099670.2-201ENST00000435130 321 ntBASIC6.22□□□□□ -1.41
USP17L3A6NCW0 AC005094.1-201ENST00000440420 368 ntBASIC6.22□□□□□ -1.41
USP17L3A6NCW0 MTND5P22-201ENST00000458380 195 ntBASIC6.22□□□□□ -1.41
USP17L3A6NCW0 PPIAP21-201ENST00000464473 501 ntBASIC6.22□□□□□ -1.41
USP17L3A6NCW0 FTH1P2-201ENST00000466086 412 ntBASIC6.22□□□□□ -1.41
USP17L3A6NCW0 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
USP17L3A6NCW0 AC128716.1-201ENST00000475129 166 ntBASIC6.22□□□□□ -1.41
USP17L3A6NCW0 AC106872.2-201ENST00000494303 480 ntBASIC6.22□□□□□ -1.41
USP17L3A6NCW0 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC6.22□□□□□ -1.41
USP17L3A6NCW0 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC6.22□□□□□ -1.41
USP17L3A6NCW0 LIAS-206ENST00000513731 826 ntTSL 5 BASIC6.22□□□□□ -1.41
USP17L3A6NCW0 RN7SKP24-201ENST00000515888 284 ntBASIC6.22□□□□□ -1.41
USP17L3A6NCW0 RNU6-1046P-201ENST00000516538 107 ntBASIC6.22□□□□□ -1.41
USP17L3A6NCW0 RNA5SP43-201ENST00000516559 110 ntBASIC6.22□□□□□ -1.41
USP17L3A6NCW0 RNU6-566P-201ENST00000516790 107 ntBASIC6.22□□□□□ -1.41
USP17L3A6NCW0 RNU6-988P-201ENST00000519081 107 ntBASIC6.22□□□□□ -1.41
USP17L3A6NCW0 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.22□□□□□ -1.41
USP17L3A6NCW0 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC6.22□□□□□ -1.41
USP17L3A6NCW0 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.22□□□□□ -1.41
USP17L3A6NCW0 MIR5583-1-201ENST00000580941 59 ntBASIC6.22□□□□□ -1.41
USP17L3A6NCW0 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.22□□□□□ -1.41
USP17L3A6NCW0 AL158196.1-201ENST00000616786 434 ntBASIC6.22□□□□□ -1.41
USP17L3A6NCW0 7SK.10-201ENST00000621414 298 ntBASIC6.22□□□□□ -1.41
USP17L3A6NCW0 AC091925.2-201ENST00000625059 256 ntBASIC6.22□□□□□ -1.41
USP17L3A6NCW0 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC6.22□□□□□ -1.41
USP17L3A6NCW0 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
USP17L3A6NCW0 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
USP17L3A6NCW0 PHKBP1-201ENST00000450951 1951 ntBASIC6.22□□□□□ -1.41
USP17L3A6NCW0 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC6.22□□□□□ -1.41
USP17L3A6NCW0 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC6.22□□□□□ -1.41
USP17L3A6NCW0 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
USP17L3A6NCW0 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.41
USP17L3A6NCW0 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC6.21□□□□□ -1.42
USP17L3A6NCW0 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
USP17L3A6NCW0 OSBPL9P4-201ENST00000371707 1800 ntBASIC6.21□□□□□ -1.42
USP17L3A6NCW0 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
USP17L3A6NCW0 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
USP17L3A6NCW0 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
USP17L3A6NCW0 SNORA24.1-201ENST00000384401 135 ntBASIC6.21□□□□□ -1.42
USP17L3A6NCW0 ENSAP1-201ENST00000392855 326 ntBASIC6.21□□□□□ -1.42
USP17L3A6NCW0 AL591848.1-201ENST00000413092 322 ntBASIC6.21□□□□□ -1.42
USP17L3A6NCW0 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC6.21□□□□□ -1.42
USP17L3A6NCW0 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC6.21□□□□□ -1.42
USP17L3A6NCW0 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC6.21□□□□□ -1.42
USP17L3A6NCW0 ST13P14-201ENST00000474095 734 ntBASIC6.21□□□□□ -1.42
USP17L3A6NCW0 RN7SL319P-201ENST00000480656 221 ntBASIC6.21□□□□□ -1.42
USP17L3A6NCW0 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC6.21□□□□□ -1.42
USP17L3A6NCW0 AC021146.2-201ENST00000504736 556 ntBASIC6.21□□□□□ -1.42
USP17L3A6NCW0 HMGN1P9-201ENST00000515212 298 ntBASIC6.21□□□□□ -1.42
USP17L3A6NCW0 AC022360.1-201ENST00000521058 340 ntBASIC6.21□□□□□ -1.42
USP17L3A6NCW0 HMGN1P28-201ENST00000521340 364 ntBASIC6.21□□□□□ -1.42
USP17L3A6NCW0 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC6.21□□□□□ -1.42
USP17L3A6NCW0 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC6.21□□□□□ -1.42
USP17L3A6NCW0 IMMP1LP2-201ENST00000552954 492 ntBASIC6.21□□□□□ -1.42
USP17L3A6NCW0 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
USP17L3A6NCW0 AC024619.4-201ENST00000580924 316 ntBASIC6.21□□□□□ -1.42
USP17L3A6NCW0 MIR4697-201ENST00000582977 78 ntBASIC6.21□□□□□ -1.42
USP17L3A6NCW0 AC092747.3-201ENST00000603769 301 ntBASIC6.21□□□□□ -1.42
USP17L3A6NCW0 AC012443.1-201ENST00000605605 231 ntBASIC6.21□□□□□ -1.42
USP17L3A6NCW0 Z82243.1-201ENST00000609432 473 ntBASIC6.21□□□□□ -1.42
USP17L3A6NCW0 MIR6780A-201ENST00000615089 68 ntBASIC6.21□□□□□ -1.42
USP17L3A6NCW0 AC133104.2-201ENST00000615272 193 ntBASIC6.21□□□□□ -1.42
USP17L3A6NCW0 AL357559.1-201ENST00000622228 274 ntBASIC6.21□□□□□ -1.42
USP17L3A6NCW0 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC6.21□□□□□ -1.42
USP17L3A6NCW0 OR52H1-202ENST00000641796 1061 ntBASIC6.21□□□□□ -1.42
USP17L3A6NCW0 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
USP17L3A6NCW0 AC007823.1-201ENST00000569932 1566 ntBASIC6.21□□□□□ -1.42
USP17L3A6NCW0 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
USP17L3A6NCW0 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
USP17L3A6NCW0 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
USP17L3A6NCW0 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
USP17L3A6NCW0 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms