Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHGA4Q9Y5G9 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.92■□□□□ 0.62
PCDHGA4Q9Y5G9 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
PCDHGA4Q9Y5G9 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
PCDHGA4Q9Y5G9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.92■□□□□ 0.62
PCDHGA4Q9Y5G9 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
PCDHGA4Q9Y5G9 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
PCDHGA4Q9Y5G9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PCDHGA4Q9Y5G9 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA4Q9Y5G9 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA4Q9Y5G9 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA4Q9Y5G9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHGA4Q9Y5G9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA4Q9Y5G9 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA4Q9Y5G9 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA4Q9Y5G9 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHGA4Q9Y5G9 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHGA4Q9Y5G9 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA4Q9Y5G9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHGA4Q9Y5G9 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA4Q9Y5G9 TFP1-202ENST00000475455 1573 ntBASIC18.91■□□□□ 0.62
PCDHGA4Q9Y5G9 AC009237.14-201ENST00000609975 1594 ntBASIC18.91■□□□□ 0.62
PCDHGA4Q9Y5G9 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA4Q9Y5G9 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA4Q9Y5G9 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA4Q9Y5G9 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
PCDHGA4Q9Y5G9 AL353807.1-201ENST00000427475 662 ntBASIC18.91■□□□□ 0.62
PCDHGA4Q9Y5G9 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA4Q9Y5G9 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC18.91■□□□□ 0.62
PCDHGA4Q9Y5G9 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.91■□□□□ 0.62
PCDHGA4Q9Y5G9 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA4Q9Y5G9 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA4Q9Y5G9 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA4Q9Y5G9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA4Q9Y5G9 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
PCDHGA4Q9Y5G9 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA4Q9Y5G9 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
PCDHGA4Q9Y5G9 BX323043.1-201ENST00000641006 1765 ntBASIC18.91■□□□□ 0.62
PCDHGA4Q9Y5G9 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 KRT16P5-201ENST00000455284 522 ntBASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 Six3os1_6.1-201ENST00000620790 196 ntBASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 AC092865.7-201ENST00000641832 219 ntBASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 FZD10-202ENST00000539839 3282 ntBASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
PCDHGA4Q9Y5G9 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.89■□□□□ 0.62
PCDHGA4Q9Y5G9 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.89■□□□□ 0.62
PCDHGA4Q9Y5G9 TMEM179-206ENST00000616017 1645 ntBASIC18.89■□□□□ 0.62
PCDHGA4Q9Y5G9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGA4Q9Y5G9 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGA4Q9Y5G9 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGA4Q9Y5G9 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHGA4Q9Y5G9 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGA4Q9Y5G9 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGA4Q9Y5G9 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.89■□□□□ 0.61
PCDHGA4Q9Y5G9 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHGA4Q9Y5G9 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
PCDHGA4Q9Y5G9 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
PCDHGA4Q9Y5G9 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.89■□□□□ 0.61
PCDHGA4Q9Y5G9 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.89■□□□□ 0.61
PCDHGA4Q9Y5G9 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHGA4Q9Y5G9 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHGA4Q9Y5G9 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.89■□□□□ 0.61
PCDHGA4Q9Y5G9 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHGA4Q9Y5G9 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.89■□□□□ 0.61
PCDHGA4Q9Y5G9 AL049597.2-201ENST00000565575 961 ntBASIC18.89■□□□□ 0.61
PCDHGA4Q9Y5G9 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHGA4Q9Y5G9 MIR6786-201ENST00000616843 113 ntBASIC18.89■□□□□ 0.61
PCDHGA4Q9Y5G9 AL590326.2-201ENST00000625139 305 ntBASIC18.89■□□□□ 0.61
PCDHGA4Q9Y5G9 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.89■□□□□ 0.61
PCDHGA4Q9Y5G9 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
PCDHGA4Q9Y5G9 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms