Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA9Q9Y5G4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA9Q9Y5G4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGA9Q9Y5G4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
PCDHGA9Q9Y5G4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGA9Q9Y5G4 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA9Q9Y5G4 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
PCDHGA9Q9Y5G4 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA9Q9Y5G4 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA9Q9Y5G4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA9Q9Y5G4 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
PCDHGA9Q9Y5G4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.94■□□□□ 0.46
PCDHGA9Q9Y5G4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGA9Q9Y5G4 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA9Q9Y5G4 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA9Q9Y5G4 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGA9Q9Y5G4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.94■□□□□ 0.46
PCDHGA9Q9Y5G4 AC139887.4-201ENST00000607877 719 ntBASIC17.94■□□□□ 0.46
PCDHGA9Q9Y5G4 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGA9Q9Y5G4 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.94■□□□□ 0.46
PCDHGA9Q9Y5G4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.94■□□□□ 0.46
PCDHGA9Q9Y5G4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
PCDHGA9Q9Y5G4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA9Q9Y5G4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
PCDHGA9Q9Y5G4 AC092720.2-201ENST00000602388 1665 ntBASIC17.93■□□□□ 0.46
PCDHGA9Q9Y5G4 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.93■□□□□ 0.46
PCDHGA9Q9Y5G4 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA9Q9Y5G4 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
PCDHGA9Q9Y5G4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA9Q9Y5G4 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA9Q9Y5G4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGA9Q9Y5G4 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.93■□□□□ 0.46
PCDHGA9Q9Y5G4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.93■□□□□ 0.46
PCDHGA9Q9Y5G4 TSPY5P-201ENST00000426936 936 ntBASIC17.93■□□□□ 0.46
PCDHGA9Q9Y5G4 AC007663.1-201ENST00000438948 1240 ntBASIC17.93■□□□□ 0.46
PCDHGA9Q9Y5G4 YBX1P2-201ENST00000489612 999 ntBASIC17.93■□□□□ 0.46
PCDHGA9Q9Y5G4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGA9Q9Y5G4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA9Q9Y5G4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.93■□□□□ 0.46
PCDHGA9Q9Y5G4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
PCDHGA9Q9Y5G4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.93■□□□□ 0.46
PCDHGA9Q9Y5G4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA9Q9Y5G4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGA9Q9Y5G4 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA9Q9Y5G4 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGA9Q9Y5G4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA9Q9Y5G4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA9Q9Y5G4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA9Q9Y5G4 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA9Q9Y5G4 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHGA9Q9Y5G4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHGA9Q9Y5G4 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA9Q9Y5G4 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PCDHGA9Q9Y5G4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHGA9Q9Y5G4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
PCDHGA9Q9Y5G4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PCDHGA9Q9Y5G4 AC092338.2-201ENST00000568827 1415 ntBASIC17.92■□□□□ 0.46
PCDHGA9Q9Y5G4 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA9Q9Y5G4 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA9Q9Y5G4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
PCDHGA9Q9Y5G4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA9Q9Y5G4 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA9Q9Y5G4 AL031133.1-201ENST00000406807 723 ntBASIC17.92■□□□□ 0.46
PCDHGA9Q9Y5G4 TSPY17P-201ENST00000450329 467 ntBASIC17.92■□□□□ 0.46
PCDHGA9Q9Y5G4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
PCDHGA9Q9Y5G4 COX11P1-201ENST00000489116 835 ntBASIC17.92■□□□□ 0.46
PCDHGA9Q9Y5G4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDHGA9Q9Y5G4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA9Q9Y5G4 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDHGA9Q9Y5G4 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDHGA9Q9Y5G4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.92■□□□□ 0.46
PCDHGA9Q9Y5G4 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA9Q9Y5G4 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA9Q9Y5G4 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHGA9Q9Y5G4 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA9Q9Y5G4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA9Q9Y5G4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA9Q9Y5G4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA9Q9Y5G4 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA9Q9Y5G4 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA9Q9Y5G4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA9Q9Y5G4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHGA9Q9Y5G4 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.91■□□□□ 0.46
PCDHGA9Q9Y5G4 AC092647.4-201ENST00000457211 535 ntBASIC17.91■□□□□ 0.46
PCDHGA9Q9Y5G4 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.91■□□□□ 0.46
PCDHGA9Q9Y5G4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHGA9Q9Y5G4 AL031432.5-201ENST00000641059 760 ntBASIC17.91■□□□□ 0.46
PCDHGA9Q9Y5G4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA9Q9Y5G4 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PCDHGA9Q9Y5G4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHGA9Q9Y5G4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA9Q9Y5G4 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHGA9Q9Y5G4 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA9Q9Y5G4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA9Q9Y5G4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHGA9Q9Y5G4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHGA9Q9Y5G4 TMEM179-206ENST00000616017 1645 ntBASIC17.9■□□□□ 0.46
PCDHGA9Q9Y5G4 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA9Q9Y5G4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
PCDHGA9Q9Y5G4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms