Protein–RNA interactions for Protein: Q9Y4E8

USP15, Ubiquitin carboxyl-terminal hydrolase 15, humanhuman

Predicted RBP Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP15Q9Y4E8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
USP15Q9Y4E8 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.66■□□□□ 0.9
USP15Q9Y4E8 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.66■□□□□ 0.9
USP15Q9Y4E8 TSPY5P-201ENST00000426936 936 ntBASIC20.66■□□□□ 0.9
USP15Q9Y4E8 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP15Q9Y4E8 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.66■□□□□ 0.9
USP15Q9Y4E8 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP15Q9Y4E8 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP15Q9Y4E8 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
USP15Q9Y4E8 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.66■□□□□ 0.9
USP15Q9Y4E8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP15Q9Y4E8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP15Q9Y4E8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.66■□□□□ 0.9
USP15Q9Y4E8 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP15Q9Y4E8 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
USP15Q9Y4E8 AC099778.1-201ENST00000568593 1911 ntBASIC20.66■□□□□ 0.9
USP15Q9Y4E8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.66■□□□□ 0.9
USP15Q9Y4E8 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP15Q9Y4E8 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
USP15Q9Y4E8 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP15Q9Y4E8 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP15Q9Y4E8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP15Q9Y4E8 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP15Q9Y4E8 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP15Q9Y4E8 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP15Q9Y4E8 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP15Q9Y4E8 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.65■□□□□ 0.9
USP15Q9Y4E8 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP15Q9Y4E8 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP15Q9Y4E8 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP15Q9Y4E8 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP15Q9Y4E8 FAM207BP-201ENST00000447172 505 ntBASIC20.65■□□□□ 0.9
USP15Q9Y4E8 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.65■□□□□ 0.9
USP15Q9Y4E8 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.65■□□□□ 0.9
USP15Q9Y4E8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.65■□□□□ 0.9
USP15Q9Y4E8 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP15Q9Y4E8 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP15Q9Y4E8 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.65■□□□□ 0.9
USP15Q9Y4E8 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
USP15Q9Y4E8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
USP15Q9Y4E8 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
USP15Q9Y4E8 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
USP15Q9Y4E8 AC121338.2-201ENST00000622535 1744 ntBASIC20.64■□□□□ 0.9
USP15Q9Y4E8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
USP15Q9Y4E8 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
USP15Q9Y4E8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
USP15Q9Y4E8 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP15Q9Y4E8 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.64■□□□□ 0.89
USP15Q9Y4E8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP15Q9Y4E8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP15Q9Y4E8 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
USP15Q9Y4E8 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP15Q9Y4E8 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP15Q9Y4E8 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP15Q9Y4E8 DUSP5P1-201ENST00000441325 1139 ntBASIC20.64■□□□□ 0.89
USP15Q9Y4E8 GPX4-207ENST00000589115 812 ntTSL 2 BASIC20.64■□□□□ 0.89
USP15Q9Y4E8 AP000692.2-201ENST00000608391 879 ntBASIC20.64■□□□□ 0.89
USP15Q9Y4E8 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.64■□□□□ 0.89
USP15Q9Y4E8 AC116562.4-202ENST00000641738 218 ntBASIC20.64■□□□□ 0.89
USP15Q9Y4E8 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
USP15Q9Y4E8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP15Q9Y4E8 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.64■□□□□ 0.89
USP15Q9Y4E8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
USP15Q9Y4E8 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
USP15Q9Y4E8 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
USP15Q9Y4E8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP15Q9Y4E8 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP15Q9Y4E8 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP15Q9Y4E8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP15Q9Y4E8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP15Q9Y4E8 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.63■□□□□ 0.89
USP15Q9Y4E8 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.63■□□□□ 0.89
USP15Q9Y4E8 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP15Q9Y4E8 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP15Q9Y4E8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
USP15Q9Y4E8 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.63■□□□□ 0.89
USP15Q9Y4E8 COX11P1-201ENST00000489116 835 ntBASIC20.63■□□□□ 0.89
USP15Q9Y4E8 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
USP15Q9Y4E8 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.63■□□□□ 0.89
USP15Q9Y4E8 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.63■□□□□ 0.89
USP15Q9Y4E8 AC130371.2-201ENST00000619443 611 ntBASIC20.63■□□□□ 0.89
USP15Q9Y4E8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP15Q9Y4E8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
USP15Q9Y4E8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.63■□□□□ 0.89
USP15Q9Y4E8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC20.63■□□□□ 0.89
USP15Q9Y4E8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP15Q9Y4E8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP15Q9Y4E8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
USP15Q9Y4E8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
USP15Q9Y4E8 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP15Q9Y4E8 AC116562.4-201ENST00000641316 2276 ntBASIC20.62■□□□□ 0.89
USP15Q9Y4E8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP15Q9Y4E8 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
USP15Q9Y4E8 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP15Q9Y4E8 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP15Q9Y4E8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP15Q9Y4E8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
USP15Q9Y4E8 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP15Q9Y4E8 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
USP15Q9Y4E8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms