Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RTCBQ9Y3I0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC24.22■■□□□ 1.47
RTCBQ9Y3I0 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC24.22■■□□□ 1.47
RTCBQ9Y3I0 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RTCBQ9Y3I0 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC24.22■■□□□ 1.47
RTCBQ9Y3I0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC24.22■■□□□ 1.47
RTCBQ9Y3I0 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC24.22■■□□□ 1.47
RTCBQ9Y3I0 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RTCBQ9Y3I0 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RTCBQ9Y3I0 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
RTCBQ9Y3I0 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC24.22■■□□□ 1.47
RTCBQ9Y3I0 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC24.22■■□□□ 1.47
RTCBQ9Y3I0 KRT8P26-201ENST00000534154 1276 ntBASIC24.22■■□□□ 1.47
RTCBQ9Y3I0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
RTCBQ9Y3I0 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC24.22■■□□□ 1.47
RTCBQ9Y3I0 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
RTCBQ9Y3I0 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RTCBQ9Y3I0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RTCBQ9Y3I0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
RTCBQ9Y3I0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
RTCBQ9Y3I0 GPAT2P1-201ENST00000444924 1672 ntBASIC24.21■■□□□ 1.47
RTCBQ9Y3I0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RTCBQ9Y3I0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RTCBQ9Y3I0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
RTCBQ9Y3I0 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RTCBQ9Y3I0 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
RTCBQ9Y3I0 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC24.21■■□□□ 1.47
RTCBQ9Y3I0 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RTCBQ9Y3I0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
RTCBQ9Y3I0 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RTCBQ9Y3I0 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC24.21■■□□□ 1.47
RTCBQ9Y3I0 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC24.21■■□□□ 1.47
RTCBQ9Y3I0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC24.21■■□□□ 1.47
RTCBQ9Y3I0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
RTCBQ9Y3I0 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
RTCBQ9Y3I0 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC24.21■■□□□ 1.47
RTCBQ9Y3I0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC24.2■■□□□ 1.47
RTCBQ9Y3I0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.47
RTCBQ9Y3I0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.47
RTCBQ9Y3I0 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RTCBQ9Y3I0 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
RTCBQ9Y3I0 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RTCBQ9Y3I0 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RTCBQ9Y3I0 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RTCBQ9Y3I0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC24.2■■□□□ 1.46
RTCBQ9Y3I0 IFNL4P1-201ENST00000607083 540 ntBASIC24.2■■□□□ 1.46
RTCBQ9Y3I0 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
RTCBQ9Y3I0 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC24.2■■□□□ 1.46
RTCBQ9Y3I0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC24.2■■□□□ 1.46
RTCBQ9Y3I0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC24.2■■□□□ 1.46
RTCBQ9Y3I0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.46
RTCBQ9Y3I0 AL162741.1-201ENST00000565563 1558 ntBASIC24.2■■□□□ 1.46
RTCBQ9Y3I0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
RTCBQ9Y3I0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC24.2■■□□□ 1.46
RTCBQ9Y3I0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC24.19■■□□□ 1.46
RTCBQ9Y3I0 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RTCBQ9Y3I0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC24.19■■□□□ 1.46
RTCBQ9Y3I0 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
RTCBQ9Y3I0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC24.19■■□□□ 1.46
RTCBQ9Y3I0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC24.19■■□□□ 1.46
RTCBQ9Y3I0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RTCBQ9Y3I0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC24.19■■□□□ 1.46
RTCBQ9Y3I0 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
RTCBQ9Y3I0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RTCBQ9Y3I0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
RTCBQ9Y3I0 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
RTCBQ9Y3I0 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
RTCBQ9Y3I0 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC24.19■■□□□ 1.46
RTCBQ9Y3I0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
RTCBQ9Y3I0 AC104417.2-201ENST00000562989 1793 ntBASIC24.19■■□□□ 1.46
RTCBQ9Y3I0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RTCBQ9Y3I0 DET1-207ENST00000564406 2315 ntTSL 2 BASIC24.18■■□□□ 1.46
RTCBQ9Y3I0 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RTCBQ9Y3I0 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RTCBQ9Y3I0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
RTCBQ9Y3I0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC24.18■■□□□ 1.46
RTCBQ9Y3I0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
RTCBQ9Y3I0 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
RTCBQ9Y3I0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC24.18■■□□□ 1.46
RTCBQ9Y3I0 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
RTCBQ9Y3I0 CHCHD2P8-201ENST00000429873 447 ntBASIC24.18■■□□□ 1.46
RTCBQ9Y3I0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC24.18■■□□□ 1.46
RTCBQ9Y3I0 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RTCBQ9Y3I0 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC24.18■■□□□ 1.46
RTCBQ9Y3I0 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC24.18■■□□□ 1.46
RTCBQ9Y3I0 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RTCBQ9Y3I0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RTCBQ9Y3I0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RTCBQ9Y3I0 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RTCBQ9Y3I0 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC24.18■■□□□ 1.46
RTCBQ9Y3I0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC24.18■■□□□ 1.46
RTCBQ9Y3I0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC24.18■■□□□ 1.46
RTCBQ9Y3I0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC24.18■■□□□ 1.46
RTCBQ9Y3I0 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
RTCBQ9Y3I0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RTCBQ9Y3I0 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
RTCBQ9Y3I0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
RTCBQ9Y3I0 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.18■■□□□ 1.46
RTCBQ9Y3I0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
RTCBQ9Y3I0 AC036111.1-201ENST00000533973 1582 ntBASIC24.17■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms