Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.09■□□□□ 0.33
COPS3Q9UNS2 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
COPS3Q9UNS2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
COPS3Q9UNS2 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.08■□□□□ 0.33
COPS3Q9UNS2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.08■□□□□ 0.33
COPS3Q9UNS2 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.08■□□□□ 0.33
COPS3Q9UNS2 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COPS3Q9UNS2 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.08■□□□□ 0.32
COPS3Q9UNS2 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.08■□□□□ 0.32
COPS3Q9UNS2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.08■□□□□ 0.32
COPS3Q9UNS2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COPS3Q9UNS2 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COPS3Q9UNS2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
COPS3Q9UNS2 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
COPS3Q9UNS2 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
COPS3Q9UNS2 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COPS3Q9UNS2 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COPS3Q9UNS2 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COPS3Q9UNS2 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
COPS3Q9UNS2 AC026185.1-201ENST00000445748 174 ntBASIC17.08■□□□□ 0.32
COPS3Q9UNS2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.08■□□□□ 0.32
COPS3Q9UNS2 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.08■□□□□ 0.32
COPS3Q9UNS2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
COPS3Q9UNS2 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.08■□□□□ 0.32
COPS3Q9UNS2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
COPS3Q9UNS2 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.08■□□□□ 0.32
COPS3Q9UNS2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COPS3Q9UNS2 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
COPS3Q9UNS2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.08■□□□□ 0.32
COPS3Q9UNS2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.08■□□□□ 0.32
COPS3Q9UNS2 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COPS3Q9UNS2 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
COPS3Q9UNS2 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
COPS3Q9UNS2 AL031598.1-201ENST00000561511 1773 ntBASIC17.07■□□□□ 0.32
COPS3Q9UNS2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.07■□□□□ 0.32
COPS3Q9UNS2 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COPS3Q9UNS2 AC005332.8-201ENST00000622750 2735 ntBASIC17.07■□□□□ 0.32
COPS3Q9UNS2 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
COPS3Q9UNS2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COPS3Q9UNS2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COPS3Q9UNS2 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
COPS3Q9UNS2 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COPS3Q9UNS2 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COPS3Q9UNS2 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COPS3Q9UNS2 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COPS3Q9UNS2 FZD10-202ENST00000539839 3282 ntBASIC17.07■□□□□ 0.32
COPS3Q9UNS2 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COPS3Q9UNS2 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
COPS3Q9UNS2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.07■□□□□ 0.32
COPS3Q9UNS2 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC17.07■□□□□ 0.32
COPS3Q9UNS2 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COPS3Q9UNS2 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
COPS3Q9UNS2 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
COPS3Q9UNS2 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.07■□□□□ 0.32
COPS3Q9UNS2 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.07■□□□□ 0.32
COPS3Q9UNS2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC17.07■□□□□ 0.32
COPS3Q9UNS2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
COPS3Q9UNS2 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COPS3Q9UNS2 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COPS3Q9UNS2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.07■□□□□ 0.32
COPS3Q9UNS2 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC17.07■□□□□ 0.32
COPS3Q9UNS2 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COPS3Q9UNS2 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COPS3Q9UNS2 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COPS3Q9UNS2 IRX1P1-201ENST00000438849 1838 ntBASIC17.07■□□□□ 0.32
COPS3Q9UNS2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COPS3Q9UNS2 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COPS3Q9UNS2 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COPS3Q9UNS2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
COPS3Q9UNS2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.06■□□□□ 0.32
COPS3Q9UNS2 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.06■□□□□ 0.32
COPS3Q9UNS2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
COPS3Q9UNS2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COPS3Q9UNS2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COPS3Q9UNS2 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COPS3Q9UNS2 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
COPS3Q9UNS2 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.06■□□□□ 0.32
COPS3Q9UNS2 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COPS3Q9UNS2 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
COPS3Q9UNS2 AC091874.3-201ENST00000512672 1195 ntBASIC17.06■□□□□ 0.32
COPS3Q9UNS2 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.06■□□□□ 0.32
COPS3Q9UNS2 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
COPS3Q9UNS2 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms