Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NOTCH3Q9UM47 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
NOTCH3Q9UM47 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NOTCH3Q9UM47 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NOTCH3Q9UM47 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC14.8□□□□□ -0.04
NOTCH3Q9UM47 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.8□□□□□ -0.04
NOTCH3Q9UM47 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NOTCH3Q9UM47 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC14.8□□□□□ -0.04
NOTCH3Q9UM47 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
NOTCH3Q9UM47 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NOTCH3Q9UM47 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NOTCH3Q9UM47 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NOTCH3Q9UM47 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NOTCH3Q9UM47 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC14.8□□□□□ -0.04
NOTCH3Q9UM47 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NOTCH3Q9UM47 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NOTCH3Q9UM47 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NOTCH3Q9UM47 TSPY5P-201ENST00000426936 936 ntBASIC14.8□□□□□ -0.04
NOTCH3Q9UM47 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NOTCH3Q9UM47 TPM4P1-201ENST00000436100 807 ntBASIC14.8□□□□□ -0.04
NOTCH3Q9UM47 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC14.8□□□□□ -0.04
NOTCH3Q9UM47 AC009947.2-201ENST00000444014 672 ntBASIC14.8□□□□□ -0.04
NOTCH3Q9UM47 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.8□□□□□ -0.04
NOTCH3Q9UM47 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NOTCH3Q9UM47 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NOTCH3Q9UM47 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NOTCH3Q9UM47 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NOTCH3Q9UM47 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC14.79□□□□□ -0.04
NOTCH3Q9UM47 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NOTCH3Q9UM47 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NOTCH3Q9UM47 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.79□□□□□ -0.04
NOTCH3Q9UM47 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NOTCH3Q9UM47 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.79□□□□□ -0.04
NOTCH3Q9UM47 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NOTCH3Q9UM47 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
NOTCH3Q9UM47 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NOTCH3Q9UM47 CALM3-202ENST00000391918 702 ntTSL 2 BASIC14.79□□□□□ -0.04
NOTCH3Q9UM47 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.79□□□□□ -0.04
NOTCH3Q9UM47 AL121956.5-201ENST00000625261 221 ntBASIC14.79□□□□□ -0.04
NOTCH3Q9UM47 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
NOTCH3Q9UM47 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
NOTCH3Q9UM47 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NOTCH3Q9UM47 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NOTCH3Q9UM47 AC092338.2-201ENST00000568827 1415 ntBASIC14.79□□□□□ -0.04
NOTCH3Q9UM47 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC14.79□□□□□ -0.04
NOTCH3Q9UM47 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NOTCH3Q9UM47 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
NOTCH3Q9UM47 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.79□□□□□ -0.04
NOTCH3Q9UM47 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
NOTCH3Q9UM47 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
NOTCH3Q9UM47 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NOTCH3Q9UM47 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NOTCH3Q9UM47 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC14.78□□□□□ -0.04
NOTCH3Q9UM47 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NOTCH3Q9UM47 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.78□□□□□ -0.04
NOTCH3Q9UM47 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NOTCH3Q9UM47 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.78□□□□□ -0.04
NOTCH3Q9UM47 AC010203.1-204ENST00000548782 407 ntBASIC14.78□□□□□ -0.04
NOTCH3Q9UM47 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NOTCH3Q9UM47 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC14.78□□□□□ -0.04
NOTCH3Q9UM47 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.78□□□□□ -0.04
NOTCH3Q9UM47 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
NOTCH3Q9UM47 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC14.78□□□□□ -0.04
NOTCH3Q9UM47 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NOTCH3Q9UM47 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC14.78□□□□□ -0.04
NOTCH3Q9UM47 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NOTCH3Q9UM47 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC14.78□□□□□ -0.04
NOTCH3Q9UM47 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
NOTCH3Q9UM47 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
NOTCH3Q9UM47 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC14.78□□□□□ -0.04
NOTCH3Q9UM47 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
NOTCH3Q9UM47 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NOTCH3Q9UM47 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NOTCH3Q9UM47 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.78□□□□□ -0.04
NOTCH3Q9UM47 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NOTCH3Q9UM47 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
NOTCH3Q9UM47 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.78□□□□□ -0.04
NOTCH3Q9UM47 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
NOTCH3Q9UM47 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
NOTCH3Q9UM47 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC14.77□□□□□ -0.04
NOTCH3Q9UM47 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NOTCH3Q9UM47 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.77□□□□□ -0.04
NOTCH3Q9UM47 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC14.77□□□□□ -0.04
NOTCH3Q9UM47 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NOTCH3Q9UM47 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NOTCH3Q9UM47 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
NOTCH3Q9UM47 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
NOTCH3Q9UM47 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.77□□□□□ -0.04
NOTCH3Q9UM47 AC116562.4-202ENST00000641738 218 ntBASIC14.77□□□□□ -0.04
NOTCH3Q9UM47 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
NOTCH3Q9UM47 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC14.77□□□□□ -0.04
NOTCH3Q9UM47 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC14.77□□□□□ -0.04
NOTCH3Q9UM47 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
NOTCH3Q9UM47 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.05
NOTCH3Q9UM47 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NOTCH3Q9UM47 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
NOTCH3Q9UM47 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NOTCH3Q9UM47 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NOTCH3Q9UM47 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NOTCH3Q9UM47 KRT18P48-201ENST00000434763 852 ntBASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms