Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.07■□□□□ 0.32
CLCF1Q9UBD9 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.07■□□□□ 0.32
CLCF1Q9UBD9 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.07■□□□□ 0.32
CLCF1Q9UBD9 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.07■□□□□ 0.32
CLCF1Q9UBD9 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLCF1Q9UBD9 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CLCF1Q9UBD9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CLCF1Q9UBD9 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLCF1Q9UBD9 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLCF1Q9UBD9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC17.07■□□□□ 0.32
CLCF1Q9UBD9 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CLCF1Q9UBD9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
CLCF1Q9UBD9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.07■□□□□ 0.32
CLCF1Q9UBD9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCF1Q9UBD9 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCF1Q9UBD9 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLCF1Q9UBD9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
CLCF1Q9UBD9 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLCF1Q9UBD9 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCF1Q9UBD9 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCF1Q9UBD9 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.06■□□□□ 0.32
CLCF1Q9UBD9 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CLCF1Q9UBD9 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLCF1Q9UBD9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CLCF1Q9UBD9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
CLCF1Q9UBD9 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCF1Q9UBD9 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCF1Q9UBD9 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCF1Q9UBD9 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.06■□□□□ 0.32
CLCF1Q9UBD9 LIN28AP1-201ENST00000429574 405 ntBASIC17.06■□□□□ 0.32
CLCF1Q9UBD9 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCF1Q9UBD9 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.06■□□□□ 0.32
CLCF1Q9UBD9 AL353719.1-201ENST00000566847 864 ntBASIC17.06■□□□□ 0.32
CLCF1Q9UBD9 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCF1Q9UBD9 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC17.06■□□□□ 0.32
CLCF1Q9UBD9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.06■□□□□ 0.32
CLCF1Q9UBD9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCF1Q9UBD9 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.06■□□□□ 0.32
CLCF1Q9UBD9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CLCF1Q9UBD9 SDHAP1-207ENST00000440850 2000 ntBASIC17.06■□□□□ 0.32
CLCF1Q9UBD9 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
CLCF1Q9UBD9 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CLCF1Q9UBD9 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCF1Q9UBD9 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC17.05■□□□□ 0.32
CLCF1Q9UBD9 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.05■□□□□ 0.32
CLCF1Q9UBD9 TREX1-205ENST00000625293 1783 ntBASIC17.05■□□□□ 0.32
CLCF1Q9UBD9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCF1Q9UBD9 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLCF1Q9UBD9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLCF1Q9UBD9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC17.05■□□□□ 0.32
CLCF1Q9UBD9 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLCF1Q9UBD9 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CLCF1Q9UBD9 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CLCF1Q9UBD9 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.05■□□□□ 0.32
CLCF1Q9UBD9 ATP5G1P1-201ENST00000448724 379 ntBASIC17.05■□□□□ 0.32
CLCF1Q9UBD9 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.32
CLCF1Q9UBD9 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.05■□□□□ 0.32
CLCF1Q9UBD9 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
CLCF1Q9UBD9 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCF1Q9UBD9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCF1Q9UBD9 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.05■□□□□ 0.32
CLCF1Q9UBD9 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.05■□□□□ 0.32
CLCF1Q9UBD9 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
CLCF1Q9UBD9 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CLCF1Q9UBD9 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 TSPY21P-201ENST00000433481 731 ntBASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 TSPY23P-201ENST00000440136 739 ntBASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CLCF1Q9UBD9 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms