Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRIT1Q9P2V4 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.56■□□□□ 0.56
LRIT1Q9P2V4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRIT1Q9P2V4 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
LRIT1Q9P2V4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRIT1Q9P2V4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.56■□□□□ 0.56
LRIT1Q9P2V4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRIT1Q9P2V4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRIT1Q9P2V4 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
LRIT1Q9P2V4 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
LRIT1Q9P2V4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.55■□□□□ 0.56
LRIT1Q9P2V4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.55■□□□□ 0.56
LRIT1Q9P2V4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRIT1Q9P2V4 AC104417.2-201ENST00000562989 1793 ntBASIC18.55■□□□□ 0.56
LRIT1Q9P2V4 PCDHAC2-203ENST00000615316 3011 ntBASIC18.55■□□□□ 0.56
LRIT1Q9P2V4 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
LRIT1Q9P2V4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.55■□□□□ 0.56
LRIT1Q9P2V4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.55■□□□□ 0.56
LRIT1Q9P2V4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRIT1Q9P2V4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRIT1Q9P2V4 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRIT1Q9P2V4 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRIT1Q9P2V4 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.55■□□□□ 0.56
LRIT1Q9P2V4 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.55■□□□□ 0.56
LRIT1Q9P2V4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.55■□□□□ 0.56
LRIT1Q9P2V4 FAM8A6P-201ENST00000407496 1135 ntBASIC18.55■□□□□ 0.56
LRIT1Q9P2V4 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
LRIT1Q9P2V4 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.55■□□□□ 0.56
LRIT1Q9P2V4 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.55■□□□□ 0.56
LRIT1Q9P2V4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.55■□□□□ 0.56
LRIT1Q9P2V4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRIT1Q9P2V4 AC140113.3-201ENST00000605663 199 ntBASIC18.55■□□□□ 0.56
LRIT1Q9P2V4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
LRIT1Q9P2V4 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.55■□□□□ 0.56
LRIT1Q9P2V4 AC011558.1-201ENST00000623459 338 ntBASIC18.55■□□□□ 0.56
LRIT1Q9P2V4 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
LRIT1Q9P2V4 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRIT1Q9P2V4 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.55■□□□□ 0.56
LRIT1Q9P2V4 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.55■□□□□ 0.56
LRIT1Q9P2V4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
LRIT1Q9P2V4 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
LRIT1Q9P2V4 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRIT1Q9P2V4 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.54■□□□□ 0.56
LRIT1Q9P2V4 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRIT1Q9P2V4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRIT1Q9P2V4 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRIT1Q9P2V4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRIT1Q9P2V4 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LRIT1Q9P2V4 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.54■□□□□ 0.56
LRIT1Q9P2V4 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
LRIT1Q9P2V4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.54■□□□□ 0.56
LRIT1Q9P2V4 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRIT1Q9P2V4 ANKRD20A18P-201ENST00000359341 492 ntBASIC18.54■□□□□ 0.56
LRIT1Q9P2V4 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRIT1Q9P2V4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.54■□□□□ 0.56
LRIT1Q9P2V4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRIT1Q9P2V4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRIT1Q9P2V4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.54■□□□□ 0.56
LRIT1Q9P2V4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRIT1Q9P2V4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LRIT1Q9P2V4 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRIT1Q9P2V4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.54■□□□□ 0.56
LRIT1Q9P2V4 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.54■□□□□ 0.56
LRIT1Q9P2V4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
LRIT1Q9P2V4 ZNF815P-204ENST00000434898 1737 ntBASIC18.54■□□□□ 0.56
LRIT1Q9P2V4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRIT1Q9P2V4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
LRIT1Q9P2V4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
LRIT1Q9P2V4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRIT1Q9P2V4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
LRIT1Q9P2V4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
LRIT1Q9P2V4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
LRIT1Q9P2V4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
LRIT1Q9P2V4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.53■□□□□ 0.56
LRIT1Q9P2V4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
LRIT1Q9P2V4 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRIT1Q9P2V4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.53■□□□□ 0.56
LRIT1Q9P2V4 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRIT1Q9P2V4 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRIT1Q9P2V4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.53■□□□□ 0.56
LRIT1Q9P2V4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRIT1Q9P2V4 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.53■□□□□ 0.56
LRIT1Q9P2V4 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.53■□□□□ 0.56
LRIT1Q9P2V4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
LRIT1Q9P2V4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.53■□□□□ 0.56
LRIT1Q9P2V4 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.53■□□□□ 0.56
LRIT1Q9P2V4 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRIT1Q9P2V4 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRIT1Q9P2V4 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRIT1Q9P2V4 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.53■□□□□ 0.56
LRIT1Q9P2V4 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.53■□□□□ 0.56
LRIT1Q9P2V4 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.53■□□□□ 0.56
LRIT1Q9P2V4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.53■□□□□ 0.56
LRIT1Q9P2V4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
LRIT1Q9P2V4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRIT1Q9P2V4 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRIT1Q9P2V4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRIT1Q9P2V4 KRT8P45-201ENST00000414328 1447 ntBASIC18.52■□□□□ 0.56
LRIT1Q9P2V4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LRIT1Q9P2V4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms