Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
CXXC1Q9P0U4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CXXC1Q9P0U4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CXXC1Q9P0U4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CXXC1Q9P0U4 AC106795.1-205ENST00000512851 1056 ntBASIC20.61■□□□□ 0.89
CXXC1Q9P0U4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC20.61■□□□□ 0.89
CXXC1Q9P0U4 AL671883.3-201ENST00000603274 991 ntBASIC20.61■□□□□ 0.89
CXXC1Q9P0U4 AL121772.3-201ENST00000610840 674 ntBASIC20.61■□□□□ 0.89
CXXC1Q9P0U4 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.61■□□□□ 0.89
CXXC1Q9P0U4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CXXC1Q9P0U4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CXXC1Q9P0U4 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.61■□□□□ 0.89
CXXC1Q9P0U4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CXXC1Q9P0U4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CXXC1Q9P0U4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CXXC1Q9P0U4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.61■□□□□ 0.89
CXXC1Q9P0U4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CXXC1Q9P0U4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CXXC1Q9P0U4 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.6■□□□□ 0.89
CXXC1Q9P0U4 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.6■□□□□ 0.89
CXXC1Q9P0U4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.6■□□□□ 0.89
CXXC1Q9P0U4 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CXXC1Q9P0U4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.6■□□□□ 0.89
CXXC1Q9P0U4 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.6■□□□□ 0.89
CXXC1Q9P0U4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.6■□□□□ 0.89
CXXC1Q9P0U4 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.6■□□□□ 0.89
CXXC1Q9P0U4 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC20.6■□□□□ 0.89
CXXC1Q9P0U4 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC20.6■□□□□ 0.89
CXXC1Q9P0U4 TSPY22P-201ENST00000427496 604 ntBASIC20.6■□□□□ 0.89
CXXC1Q9P0U4 HLA-F-220ENST00000434407 884 ntBASIC20.6■□□□□ 0.89
CXXC1Q9P0U4 DRAXINP1-201ENST00000437611 948 ntBASIC20.6■□□□□ 0.89
CXXC1Q9P0U4 LINC00265-3P-201ENST00000447588 903 ntBASIC20.6■□□□□ 0.89
CXXC1Q9P0U4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
CXXC1Q9P0U4 KRT18P31-201ENST00000506277 1292 ntBASIC20.6■□□□□ 0.89
CXXC1Q9P0U4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CXXC1Q9P0U4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.6■□□□□ 0.89
CXXC1Q9P0U4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CXXC1Q9P0U4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CXXC1Q9P0U4 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CXXC1Q9P0U4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CXXC1Q9P0U4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.6■□□□□ 0.89
CXXC1Q9P0U4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.6■□□□□ 0.89
CXXC1Q9P0U4 AC036111.1-201ENST00000533973 1582 ntBASIC20.59■□□□□ 0.89
CXXC1Q9P0U4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CXXC1Q9P0U4 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.59■□□□□ 0.89
CXXC1Q9P0U4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CXXC1Q9P0U4 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.59■□□□□ 0.89
CXXC1Q9P0U4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.59■□□□□ 0.89
CXXC1Q9P0U4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.59■□□□□ 0.89
CXXC1Q9P0U4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CXXC1Q9P0U4 MRPL3P1-201ENST00000400109 1033 ntBASIC20.59■□□□□ 0.89
CXXC1Q9P0U4 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CXXC1Q9P0U4 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.59■□□□□ 0.89
CXXC1Q9P0U4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CXXC1Q9P0U4 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CXXC1Q9P0U4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CXXC1Q9P0U4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.59■□□□□ 0.89
CXXC1Q9P0U4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.59■□□□□ 0.89
CXXC1Q9P0U4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CXXC1Q9P0U4 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.59■□□□□ 0.89
CXXC1Q9P0U4 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC20.59■□□□□ 0.89
CXXC1Q9P0U4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CXXC1Q9P0U4 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CXXC1Q9P0U4 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.59■□□□□ 0.89
CXXC1Q9P0U4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CXXC1Q9P0U4 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CXXC1Q9P0U4 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CXXC1Q9P0U4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CXXC1Q9P0U4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.59■□□□□ 0.89
CXXC1Q9P0U4 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CXXC1Q9P0U4 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CXXC1Q9P0U4 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CXXC1Q9P0U4 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CXXC1Q9P0U4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.58■□□□□ 0.89
CXXC1Q9P0U4 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CXXC1Q9P0U4 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CXXC1Q9P0U4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CXXC1Q9P0U4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CXXC1Q9P0U4 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.58■□□□□ 0.89
CXXC1Q9P0U4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CXXC1Q9P0U4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CXXC1Q9P0U4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CXXC1Q9P0U4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CXXC1Q9P0U4 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC20.58■□□□□ 0.89
CXXC1Q9P0U4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.58■□□□□ 0.89
CXXC1Q9P0U4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.58■□□□□ 0.89
CXXC1Q9P0U4 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CXXC1Q9P0U4 AC139530.3-201ENST00000620344 690 ntBASIC20.58■□□□□ 0.89
CXXC1Q9P0U4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
CXXC1Q9P0U4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CXXC1Q9P0U4 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.88
CXXC1Q9P0U4 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CXXC1Q9P0U4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CXXC1Q9P0U4 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CXXC1Q9P0U4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CXXC1Q9P0U4 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CXXC1Q9P0U4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.57■□□□□ 0.88
CXXC1Q9P0U4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
CXXC1Q9P0U4 SEC1P-202ENST00000473944 940 ntBASIC20.57■□□□□ 0.88
CXXC1Q9P0U4 RNF126P1-202ENST00000569893 925 ntBASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms