Protein–RNA interactions for Protein: Q9NWW5

CLN6, Ceroid-lipofuscinosis neuronal protein 6, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6Q9NWW5 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLN6Q9NWW5 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLN6Q9NWW5 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC17.51■□□□□ 0.39
CLN6Q9NWW5 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLN6Q9NWW5 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.51■□□□□ 0.39
CLN6Q9NWW5 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLN6Q9NWW5 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CLN6Q9NWW5 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CLN6Q9NWW5 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLN6Q9NWW5 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLN6Q9NWW5 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLN6Q9NWW5 AC034268.1-201ENST00000441047 882 ntBASIC17.51■□□□□ 0.39
CLN6Q9NWW5 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC17.51■□□□□ 0.39
CLN6Q9NWW5 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.51■□□□□ 0.39
CLN6Q9NWW5 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLN6Q9NWW5 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLN6Q9NWW5 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CLN6Q9NWW5 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLN6Q9NWW5 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLN6Q9NWW5 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLN6Q9NWW5 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.51■□□□□ 0.39
CLN6Q9NWW5 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLN6Q9NWW5 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.51■□□□□ 0.39
CLN6Q9NWW5 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLN6Q9NWW5 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLN6Q9NWW5 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 AL354751.1-201ENST00000412768 1863 ntBASIC17.5■□□□□ 0.39
CLN6Q9NWW5 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 IRX1P1-201ENST00000438849 1838 ntBASIC17.5■□□□□ 0.39
CLN6Q9NWW5 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CLN6Q9NWW5 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLN6Q9NWW5 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLN6Q9NWW5 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLN6Q9NWW5 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLN6Q9NWW5 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CLN6Q9NWW5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLN6Q9NWW5 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.49■□□□□ 0.39
CLN6Q9NWW5 AC068338.2-201ENST00000563278 1430 ntBASIC17.49■□□□□ 0.39
CLN6Q9NWW5 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLN6Q9NWW5 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
CLN6Q9NWW5 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.49■□□□□ 0.39
CLN6Q9NWW5 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLN6Q9NWW5 PCDHB18P-201ENST00000524813 2368 ntBASIC17.49■□□□□ 0.39
CLN6Q9NWW5 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.49■□□□□ 0.39
CLN6Q9NWW5 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.49■□□□□ 0.39
CLN6Q9NWW5 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.49■□□□□ 0.39
CLN6Q9NWW5 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLN6Q9NWW5 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.49■□□□□ 0.39
CLN6Q9NWW5 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.49■□□□□ 0.39
CLN6Q9NWW5 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.49■□□□□ 0.39
CLN6Q9NWW5 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.49■□□□□ 0.39
CLN6Q9NWW5 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLN6Q9NWW5 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
CLN6Q9NWW5 AL512353.2-201ENST00000448759 1962 ntBASIC17.49■□□□□ 0.39
CLN6Q9NWW5 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLN6Q9NWW5 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CLN6Q9NWW5 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.49■□□□□ 0.39
CLN6Q9NWW5 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CLN6Q9NWW5 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.49■□□□□ 0.39
CLN6Q9NWW5 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CLN6Q9NWW5 AC116351.2-201ENST00000606540 1585 ntBASIC17.49■□□□□ 0.39
CLN6Q9NWW5 AL133373.2-201ENST00000623187 2828 ntBASIC17.48■□□□□ 0.39
CLN6Q9NWW5 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLN6Q9NWW5 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.48■□□□□ 0.39
CLN6Q9NWW5 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.48■□□□□ 0.39
CLN6Q9NWW5 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLN6Q9NWW5 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CLN6Q9NWW5 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.48■□□□□ 0.39
CLN6Q9NWW5 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms