Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
HCFC1R1Q9NWW0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HCFC1R1Q9NWW0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
HCFC1R1Q9NWW0 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HCFC1R1Q9NWW0 STARP1-201ENST00000397973 869 ntBASIC19.94■□□□□ 0.78
HCFC1R1Q9NWW0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
HCFC1R1Q9NWW0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.94■□□□□ 0.78
HCFC1R1Q9NWW0 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC19.94■□□□□ 0.78
HCFC1R1Q9NWW0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC19.94■□□□□ 0.78
HCFC1R1Q9NWW0 KRT126P-201ENST00000549467 1181 ntBASIC19.94■□□□□ 0.78
HCFC1R1Q9NWW0 ZNF444P1-201ENST00000559497 298 ntBASIC19.94■□□□□ 0.78
HCFC1R1Q9NWW0 AL136038.3-201ENST00000561909 1096 ntBASIC19.94■□□□□ 0.78
HCFC1R1Q9NWW0 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.94■□□□□ 0.78
HCFC1R1Q9NWW0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HCFC1R1Q9NWW0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.94■□□□□ 0.78
HCFC1R1Q9NWW0 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HCFC1R1Q9NWW0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
HCFC1R1Q9NWW0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HCFC1R1Q9NWW0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HCFC1R1Q9NWW0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HCFC1R1Q9NWW0 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HCFC1R1Q9NWW0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HCFC1R1Q9NWW0 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HCFC1R1Q9NWW0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HCFC1R1Q9NWW0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
HCFC1R1Q9NWW0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.93■□□□□ 0.78
HCFC1R1Q9NWW0 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HCFC1R1Q9NWW0 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC19.93■□□□□ 0.78
HCFC1R1Q9NWW0 DUSP5P1-201ENST00000441325 1139 ntBASIC19.93■□□□□ 0.78
HCFC1R1Q9NWW0 HCG4P8-203ENST00000443049 980 ntBASIC19.93■□□□□ 0.78
HCFC1R1Q9NWW0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.93■□□□□ 0.78
HCFC1R1Q9NWW0 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.93■□□□□ 0.78
HCFC1R1Q9NWW0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.93■□□□□ 0.78
HCFC1R1Q9NWW0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HCFC1R1Q9NWW0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HCFC1R1Q9NWW0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
HCFC1R1Q9NWW0 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
HCFC1R1Q9NWW0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
HCFC1R1Q9NWW0 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HCFC1R1Q9NWW0 LINC01311-201ENST00000565162 1445 ntBASIC19.93■□□□□ 0.78
HCFC1R1Q9NWW0 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HCFC1R1Q9NWW0 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
HCFC1R1Q9NWW0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.92■□□□□ 0.78
HCFC1R1Q9NWW0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.92■□□□□ 0.78
HCFC1R1Q9NWW0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC19.92■□□□□ 0.78
HCFC1R1Q9NWW0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HCFC1R1Q9NWW0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HCFC1R1Q9NWW0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HCFC1R1Q9NWW0 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.92■□□□□ 0.78
HCFC1R1Q9NWW0 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HCFC1R1Q9NWW0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.92■□□□□ 0.78
HCFC1R1Q9NWW0 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.92■□□□□ 0.78
HCFC1R1Q9NWW0 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HCFC1R1Q9NWW0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.92■□□□□ 0.78
HCFC1R1Q9NWW0 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HCFC1R1Q9NWW0 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
HCFC1R1Q9NWW0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
HCFC1R1Q9NWW0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.92■□□□□ 0.78
HCFC1R1Q9NWW0 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.92■□□□□ 0.78
HCFC1R1Q9NWW0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HCFC1R1Q9NWW0 AC069148.1-201ENST00000608741 768 ntBASIC19.92■□□□□ 0.78
HCFC1R1Q9NWW0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.92■□□□□ 0.78
HCFC1R1Q9NWW0 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HCFC1R1Q9NWW0 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.92■□□□□ 0.78
HCFC1R1Q9NWW0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.92■□□□□ 0.78
HCFC1R1Q9NWW0 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.92■□□□□ 0.78
HCFC1R1Q9NWW0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HCFC1R1Q9NWW0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HCFC1R1Q9NWW0 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.91■□□□□ 0.78
HCFC1R1Q9NWW0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.91■□□□□ 0.78
HCFC1R1Q9NWW0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HCFC1R1Q9NWW0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HCFC1R1Q9NWW0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HCFC1R1Q9NWW0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HCFC1R1Q9NWW0 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HCFC1R1Q9NWW0 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.91■□□□□ 0.78
HCFC1R1Q9NWW0 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HCFC1R1Q9NWW0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HCFC1R1Q9NWW0 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.91■□□□□ 0.78
HCFC1R1Q9NWW0 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.91■□□□□ 0.78
HCFC1R1Q9NWW0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.91■□□□□ 0.78
HCFC1R1Q9NWW0 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HCFC1R1Q9NWW0 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.91■□□□□ 0.78
HCFC1R1Q9NWW0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
HCFC1R1Q9NWW0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HCFC1R1Q9NWW0 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HCFC1R1Q9NWW0 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HCFC1R1Q9NWW0 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HCFC1R1Q9NWW0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HCFC1R1Q9NWW0 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
HCFC1R1Q9NWW0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.91■□□□□ 0.78
HCFC1R1Q9NWW0 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.91■□□□□ 0.78
HCFC1R1Q9NWW0 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HCFC1R1Q9NWW0 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HCFC1R1Q9NWW0 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HCFC1R1Q9NWW0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.91■□□□□ 0.78
HCFC1R1Q9NWW0 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HCFC1R1Q9NWW0 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HCFC1R1Q9NWW0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
HCFC1R1Q9NWW0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms