Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 AL049637.2-201ENST00000641778 930 ntBASIC21.37■■□□□ 1.01
BLOC1S4Q9NUP1 AL031985.4-201ENST00000642138 673 ntBASIC21.37■■□□□ 1.01
BLOC1S4Q9NUP1 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BLOC1S4Q9NUP1 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.37■■□□□ 1.01
BLOC1S4Q9NUP1 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BLOC1S4Q9NUP1 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
BLOC1S4Q9NUP1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BLOC1S4Q9NUP1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.37■■□□□ 1.01
BLOC1S4Q9NUP1 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
BLOC1S4Q9NUP1 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC21.37■■□□□ 1.01
BLOC1S4Q9NUP1 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BLOC1S4Q9NUP1 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.37■■□□□ 1.01
BLOC1S4Q9NUP1 KRT8P11-201ENST00000409686 1436 ntBASIC21.37■■□□□ 1.01
BLOC1S4Q9NUP1 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
BLOC1S4Q9NUP1 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
BLOC1S4Q9NUP1 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BLOC1S4Q9NUP1 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.36■■□□□ 1.01
BLOC1S4Q9NUP1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BLOC1S4Q9NUP1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.36■■□□□ 1.01
BLOC1S4Q9NUP1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BLOC1S4Q9NUP1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BLOC1S4Q9NUP1 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC21.36■■□□□ 1.01
BLOC1S4Q9NUP1 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.36■■□□□ 1.01
BLOC1S4Q9NUP1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.36■■□□□ 1.01
BLOC1S4Q9NUP1 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.36■■□□□ 1.01
BLOC1S4Q9NUP1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC21.36■■□□□ 1.01
BLOC1S4Q9NUP1 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
BLOC1S4Q9NUP1 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
BLOC1S4Q9NUP1 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
BLOC1S4Q9NUP1 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
BLOC1S4Q9NUP1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BLOC1S4Q9NUP1 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
BLOC1S4Q9NUP1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.36■■□□□ 1.01
BLOC1S4Q9NUP1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
BLOC1S4Q9NUP1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
BLOC1S4Q9NUP1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BLOC1S4Q9NUP1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BLOC1S4Q9NUP1 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BLOC1S4Q9NUP1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.35■■□□□ 1.01
BLOC1S4Q9NUP1 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BLOC1S4Q9NUP1 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
BLOC1S4Q9NUP1 AC008550.1-201ENST00000511500 884 ntBASIC21.35■■□□□ 1.01
BLOC1S4Q9NUP1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.35■■□□□ 1.01
BLOC1S4Q9NUP1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
BLOC1S4Q9NUP1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC21.35■■□□□ 1.01
BLOC1S4Q9NUP1 AC130371.2-201ENST00000619443 611 ntBASIC21.35■■□□□ 1.01
BLOC1S4Q9NUP1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.35■■□□□ 1.01
BLOC1S4Q9NUP1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.35■■□□□ 1.01
BLOC1S4Q9NUP1 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BLOC1S4Q9NUP1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.35■■□□□ 1.01
BLOC1S4Q9NUP1 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BLOC1S4Q9NUP1 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BLOC1S4Q9NUP1 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
BLOC1S4Q9NUP1 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
BLOC1S4Q9NUP1 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
BLOC1S4Q9NUP1 TNXA-203ENST00000507684 2038 ntBASIC21.34■■□□□ 1.01
BLOC1S4Q9NUP1 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
BLOC1S4Q9NUP1 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.34■■□□□ 1.01
BLOC1S4Q9NUP1 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
BLOC1S4Q9NUP1 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
BLOC1S4Q9NUP1 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.34■■□□□ 1.01
BLOC1S4Q9NUP1 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
BLOC1S4Q9NUP1 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.34■■□□□ 1.01
BLOC1S4Q9NUP1 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
BLOC1S4Q9NUP1 MDFI-202ENST00000373050 809 ntTSL 2 BASIC21.34■■□□□ 1.01
BLOC1S4Q9NUP1 AC004951.3-201ENST00000418645 1148 ntBASIC21.34■■□□□ 1.01
BLOC1S4Q9NUP1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.34■■□□□ 1.01
BLOC1S4Q9NUP1 B3GAT3P1-201ENST00000471720 806 ntBASIC21.34■■□□□ 1.01
BLOC1S4Q9NUP1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC21.34■■□□□ 1.01
BLOC1S4Q9NUP1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
BLOC1S4Q9NUP1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.34■■□□□ 1.01
BLOC1S4Q9NUP1 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC21.34■■□□□ 1.01
BLOC1S4Q9NUP1 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.34■■□□□ 1.01
BLOC1S4Q9NUP1 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
BLOC1S4Q9NUP1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
BLOC1S4Q9NUP1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
BLOC1S4Q9NUP1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
BLOC1S4Q9NUP1 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
BLOC1S4Q9NUP1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.34■■□□□ 1.01
BLOC1S4Q9NUP1 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC21.34■■□□□ 1.01
BLOC1S4Q9NUP1 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC21.34■■□□□ 1.01
BLOC1S4Q9NUP1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
BLOC1S4Q9NUP1 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
BLOC1S4Q9NUP1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
BLOC1S4Q9NUP1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
BLOC1S4Q9NUP1 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
BLOC1S4Q9NUP1 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
BLOC1S4Q9NUP1 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
BLOC1S4Q9NUP1 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC21.33■■□□□ 1.01
BLOC1S4Q9NUP1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC21.33■■□□□ 1.01
BLOC1S4Q9NUP1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
BLOC1S4Q9NUP1 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC21.33■■□□□ 1.01
BLOC1S4Q9NUP1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.33■■□□□ 1.01
BLOC1S4Q9NUP1 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.33■■□□□ 1.01
BLOC1S4Q9NUP1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.33■■□□□ 1.01
BLOC1S4Q9NUP1 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.33■■□□□ 1.01
BLOC1S4Q9NUP1 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.33■■□□□ 1.01
BLOC1S4Q9NUP1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.33■■□□□ 1.01
BLOC1S4Q9NUP1 MIR6786-201ENST00000616843 113 ntBASIC21.33■■□□□ 1.01
BLOC1S4Q9NUP1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms