Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.49■□□□□ 0.71
LRRC40Q9H9A6 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LRRC40Q9H9A6 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
LRRC40Q9H9A6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC40Q9H9A6 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.49■□□□□ 0.71
LRRC40Q9H9A6 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
LRRC40Q9H9A6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.49■□□□□ 0.71
LRRC40Q9H9A6 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 AL160286.2-201ENST00000567150 934 ntBASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 RN7SL471P-201ENST00000580476 299 ntBASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 AC124016.1-201ENST00000609552 612 ntBASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
LRRC40Q9H9A6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC40Q9H9A6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC40Q9H9A6 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC40Q9H9A6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC40Q9H9A6 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.47■□□□□ 0.71
LRRC40Q9H9A6 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC40Q9H9A6 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.47■□□□□ 0.71
LRRC40Q9H9A6 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.47■□□□□ 0.71
LRRC40Q9H9A6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
LRRC40Q9H9A6 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.47■□□□□ 0.71
LRRC40Q9H9A6 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC40Q9H9A6 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC40Q9H9A6 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC40Q9H9A6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.47■□□□□ 0.71
LRRC40Q9H9A6 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC40Q9H9A6 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC40Q9H9A6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.47■□□□□ 0.71
LRRC40Q9H9A6 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC40Q9H9A6 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.47■□□□□ 0.71
LRRC40Q9H9A6 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.47■□□□□ 0.71
LRRC40Q9H9A6 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC40Q9H9A6 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.47■□□□□ 0.71
LRRC40Q9H9A6 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC40Q9H9A6 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC40Q9H9A6 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
LRRC40Q9H9A6 AL049812.1-201ENST00000432563 2267 ntBASIC19.46■□□□□ 0.71
LRRC40Q9H9A6 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC40Q9H9A6 FP475955.4-201ENST00000623131 1990 ntBASIC19.46■□□□□ 0.71
LRRC40Q9H9A6 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
LRRC40Q9H9A6 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC40Q9H9A6 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
LRRC40Q9H9A6 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC40Q9H9A6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
LRRC40Q9H9A6 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC40Q9H9A6 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC40Q9H9A6 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC40Q9H9A6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC40Q9H9A6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC40Q9H9A6 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
LRRC40Q9H9A6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
LRRC40Q9H9A6 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.46■□□□□ 0.71
LRRC40Q9H9A6 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
LRRC40Q9H9A6 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.46■□□□□ 0.71
LRRC40Q9H9A6 AC110285.5-201ENST00000611501 352 ntBASIC19.46■□□□□ 0.71
LRRC40Q9H9A6 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC40Q9H9A6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC40Q9H9A6 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.46■□□□□ 0.71
LRRC40Q9H9A6 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC40Q9H9A6 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC40Q9H9A6 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC40Q9H9A6 IRX1P1-201ENST00000438849 1838 ntBASIC19.46■□□□□ 0.71
LRRC40Q9H9A6 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
LRRC40Q9H9A6 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC40Q9H9A6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
LRRC40Q9H9A6 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC40Q9H9A6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
LRRC40Q9H9A6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.45■□□□□ 0.7
LRRC40Q9H9A6 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LRRC40Q9H9A6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
LRRC40Q9H9A6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms