Protein–RNA interactions for Protein: Q9H4I3

TRABD, TraB domain-containing protein, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABDQ9H4I3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
TRABDQ9H4I3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRABDQ9H4I3 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRABDQ9H4I3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.73■□□□□ 0.75
TRABDQ9H4I3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRABDQ9H4I3 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.73■□□□□ 0.75
TRABDQ9H4I3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.73■□□□□ 0.75
TRABDQ9H4I3 MIR4651-201ENST00000582622 73 ntBASIC19.73■□□□□ 0.75
TRABDQ9H4I3 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.73■□□□□ 0.75
TRABDQ9H4I3 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRABDQ9H4I3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.73■□□□□ 0.75
TRABDQ9H4I3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRABDQ9H4I3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRABDQ9H4I3 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRABDQ9H4I3 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRABDQ9H4I3 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
TRABDQ9H4I3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRABDQ9H4I3 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRABDQ9H4I3 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRABDQ9H4I3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
TRABDQ9H4I3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.72■□□□□ 0.75
TRABDQ9H4I3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.72■□□□□ 0.75
TRABDQ9H4I3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRABDQ9H4I3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRABDQ9H4I3 AP006587.1-201ENST00000534129 1502 ntBASIC19.72■□□□□ 0.75
TRABDQ9H4I3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRABDQ9H4I3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRABDQ9H4I3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.72■□□□□ 0.75
TRABDQ9H4I3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRABDQ9H4I3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRABDQ9H4I3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRABDQ9H4I3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRABDQ9H4I3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.72■□□□□ 0.75
TRABDQ9H4I3 FAM201B-201ENST00000458407 597 ntBASIC19.72■□□□□ 0.75
TRABDQ9H4I3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.72■□□□□ 0.75
TRABDQ9H4I3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC19.72■□□□□ 0.75
TRABDQ9H4I3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.72■□□□□ 0.75
TRABDQ9H4I3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.72■□□□□ 0.75
TRABDQ9H4I3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRABDQ9H4I3 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRABDQ9H4I3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.72■□□□□ 0.75
TRABDQ9H4I3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TRABDQ9H4I3 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRABDQ9H4I3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.72■□□□□ 0.75
TRABDQ9H4I3 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRABDQ9H4I3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRABDQ9H4I3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
TRABDQ9H4I3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
TRABDQ9H4I3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
TRABDQ9H4I3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TRABDQ9H4I3 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.71■□□□□ 0.75
TRABDQ9H4I3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRABDQ9H4I3 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRABDQ9H4I3 AC007613.1-201ENST00000572811 2597 ntBASIC19.71■□□□□ 0.75
TRABDQ9H4I3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRABDQ9H4I3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRABDQ9H4I3 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRABDQ9H4I3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.71■□□□□ 0.75
TRABDQ9H4I3 YBX1P10-201ENST00000444752 975 ntBASIC19.71■□□□□ 0.75
TRABDQ9H4I3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.71■□□□□ 0.75
TRABDQ9H4I3 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.71■□□□□ 0.75
TRABDQ9H4I3 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRABDQ9H4I3 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC19.71■□□□□ 0.75
TRABDQ9H4I3 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.71■□□□□ 0.75
TRABDQ9H4I3 MTDHP1-201ENST00000605323 784 ntBASIC19.71■□□□□ 0.75
TRABDQ9H4I3 AC006058.3-201ENST00000606217 1069 ntBASIC19.71■□□□□ 0.75
TRABDQ9H4I3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRABDQ9H4I3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRABDQ9H4I3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TRABDQ9H4I3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRABDQ9H4I3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.71■□□□□ 0.75
TRABDQ9H4I3 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRABDQ9H4I3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRABDQ9H4I3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TRABDQ9H4I3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.7■□□□□ 0.74
TRABDQ9H4I3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.7■□□□□ 0.74
TRABDQ9H4I3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRABDQ9H4I3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.7■□□□□ 0.74
TRABDQ9H4I3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRABDQ9H4I3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRABDQ9H4I3 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRABDQ9H4I3 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.7■□□□□ 0.74
TRABDQ9H4I3 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.7■□□□□ 0.74
TRABDQ9H4I3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRABDQ9H4I3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TRABDQ9H4I3 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRABDQ9H4I3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRABDQ9H4I3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
TRABDQ9H4I3 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRABDQ9H4I3 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.7■□□□□ 0.74
TRABDQ9H4I3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.7■□□□□ 0.74
TRABDQ9H4I3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC19.7■□□□□ 0.74
TRABDQ9H4I3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRABDQ9H4I3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRABDQ9H4I3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TRABDQ9H4I3 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRABDQ9H4I3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRABDQ9H4I3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.69■□□□□ 0.74
TRABDQ9H4I3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRABDQ9H4I3 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms