Protein–RNA interactions for Protein: Q9H422

HIPK3, Homeodomain-interacting protein kinase 3, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3Q9H422 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.98■□□□□ 0.95
HIPK3Q9H422 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
HIPK3Q9H422 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
HIPK3Q9H422 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
HIPK3Q9H422 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.98■□□□□ 0.95
HIPK3Q9H422 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
HIPK3Q9H422 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
HIPK3Q9H422 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
HIPK3Q9H422 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
HIPK3Q9H422 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HIPK3Q9H422 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.97■□□□□ 0.95
HIPK3Q9H422 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HIPK3Q9H422 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HIPK3Q9H422 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HIPK3Q9H422 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HIPK3Q9H422 BX276092.5-203ENST00000456199 560 ntBASIC20.97■□□□□ 0.95
HIPK3Q9H422 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HIPK3Q9H422 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.97■□□□□ 0.95
HIPK3Q9H422 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.97■□□□□ 0.95
HIPK3Q9H422 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
HIPK3Q9H422 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.97■□□□□ 0.95
HIPK3Q9H422 AL121672.3-201ENST00000608644 468 ntBASIC20.97■□□□□ 0.95
HIPK3Q9H422 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
HIPK3Q9H422 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
HIPK3Q9H422 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
HIPK3Q9H422 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HIPK3Q9H422 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
HIPK3Q9H422 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
HIPK3Q9H422 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
HIPK3Q9H422 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.96■□□□□ 0.95
HIPK3Q9H422 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
HIPK3Q9H422 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HIPK3Q9H422 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
HIPK3Q9H422 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC20.96■□□□□ 0.95
HIPK3Q9H422 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
HIPK3Q9H422 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.96■□□□□ 0.95
HIPK3Q9H422 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HIPK3Q9H422 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
HIPK3Q9H422 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.96■□□□□ 0.95
HIPK3Q9H422 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
HIPK3Q9H422 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
HIPK3Q9H422 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HIPK3Q9H422 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HIPK3Q9H422 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HIPK3Q9H422 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC20.96■□□□□ 0.95
HIPK3Q9H422 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
HIPK3Q9H422 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.96■□□□□ 0.95
HIPK3Q9H422 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HIPK3Q9H422 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
HIPK3Q9H422 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HIPK3Q9H422 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HIPK3Q9H422 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.95■□□□□ 0.94
HIPK3Q9H422 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
HIPK3Q9H422 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
HIPK3Q9H422 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
HIPK3Q9H422 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.95■□□□□ 0.94
HIPK3Q9H422 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HIPK3Q9H422 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
HIPK3Q9H422 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
HIPK3Q9H422 AC016734.2-201ENST00000624325 1377 ntBASIC20.95■□□□□ 0.94
HIPK3Q9H422 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
HIPK3Q9H422 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
HIPK3Q9H422 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC20.94■□□□□ 0.94
HIPK3Q9H422 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.94■□□□□ 0.94
HIPK3Q9H422 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HIPK3Q9H422 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
HIPK3Q9H422 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HIPK3Q9H422 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HIPK3Q9H422 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HIPK3Q9H422 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HIPK3Q9H422 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HIPK3Q9H422 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
HIPK3Q9H422 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HIPK3Q9H422 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.94■□□□□ 0.94
HIPK3Q9H422 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HIPK3Q9H422 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HIPK3Q9H422 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.94■□□□□ 0.94
HIPK3Q9H422 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HIPK3Q9H422 FAAHP1-202ENST00000446499 1238 ntBASIC20.94■□□□□ 0.94
HIPK3Q9H422 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.94■□□□□ 0.94
HIPK3Q9H422 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC20.94■□□□□ 0.94
HIPK3Q9H422 MIR3180-1-201ENST00000580374 94 ntBASIC20.94■□□□□ 0.94
HIPK3Q9H422 MIR3180-3-201ENST00000584616 94 ntBASIC20.94■□□□□ 0.94
HIPK3Q9H422 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.94■□□□□ 0.94
HIPK3Q9H422 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.94■□□□□ 0.94
HIPK3Q9H422 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.94■□□□□ 0.94
HIPK3Q9H422 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
HIPK3Q9H422 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
HIPK3Q9H422 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
HIPK3Q9H422 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HIPK3Q9H422 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.94■□□□□ 0.94
HIPK3Q9H422 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.94■□□□□ 0.94
HIPK3Q9H422 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
HIPK3Q9H422 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
HIPK3Q9H422 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
HIPK3Q9H422 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
HIPK3Q9H422 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC20.93■□□□□ 0.94
HIPK3Q9H422 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
HIPK3Q9H422 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.93■□□□□ 0.94
HIPK3Q9H422 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms