Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH23Q9H251 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH23Q9H251 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.42■□□□□ 0.86
CDH23Q9H251 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDH23Q9H251 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDH23Q9H251 PMS2P2-201ENST00000425039 1128 ntBASIC20.42■□□□□ 0.86
CDH23Q9H251 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.42■□□□□ 0.86
CDH23Q9H251 KRT8P26-201ENST00000534154 1276 ntBASIC20.42■□□□□ 0.86
CDH23Q9H251 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH23Q9H251 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH23Q9H251 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH23Q9H251 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDH23Q9H251 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH23Q9H251 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.42■□□□□ 0.86
CDH23Q9H251 KRT18P58-201ENST00000527480 1120 ntBASIC20.42■□□□□ 0.86
CDH23Q9H251 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDH23Q9H251 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.42■□□□□ 0.86
CDH23Q9H251 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.42■□□□□ 0.86
CDH23Q9H251 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDH23Q9H251 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CDH23Q9H251 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
CDH23Q9H251 AKR1C7P-201ENST00000305623 895 ntBASIC20.42■□□□□ 0.86
CDH23Q9H251 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDH23Q9H251 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.42■□□□□ 0.86
CDH23Q9H251 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.41■□□□□ 0.86
CDH23Q9H251 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CDH23Q9H251 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CDH23Q9H251 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH23Q9H251 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
CDH23Q9H251 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.41■□□□□ 0.86
CDH23Q9H251 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.41■□□□□ 0.86
CDH23Q9H251 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC20.41■□□□□ 0.86
CDH23Q9H251 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
CDH23Q9H251 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC20.41■□□□□ 0.86
CDH23Q9H251 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH23Q9H251 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
CDH23Q9H251 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CDH23Q9H251 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
CDH23Q9H251 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.41■□□□□ 0.86
CDH23Q9H251 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH23Q9H251 AC055717.3-201ENST00000622967 595 ntBASIC20.41■□□□□ 0.86
CDH23Q9H251 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH23Q9H251 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH23Q9H251 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
CDH23Q9H251 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.41■□□□□ 0.86
CDH23Q9H251 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDH23Q9H251 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH23Q9H251 POLD2P1-201ENST00000511220 997 ntBASIC20.4■□□□□ 0.86
CDH23Q9H251 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
CDH23Q9H251 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.4■□□□□ 0.86
CDH23Q9H251 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDH23Q9H251 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH23Q9H251 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH23Q9H251 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CDH23Q9H251 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
CDH23Q9H251 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.4■□□□□ 0.86
CDH23Q9H251 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDH23Q9H251 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
CDH23Q9H251 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDH23Q9H251 KRT8P11-201ENST00000409686 1436 ntBASIC20.4■□□□□ 0.86
CDH23Q9H251 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH23Q9H251 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH23Q9H251 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH23Q9H251 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH23Q9H251 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDH23Q9H251 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.4■□□□□ 0.86
CDH23Q9H251 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.4■□□□□ 0.86
CDH23Q9H251 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.4■□□□□ 0.86
CDH23Q9H251 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
CDH23Q9H251 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.39■□□□□ 0.86
CDH23Q9H251 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDH23Q9H251 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.39■□□□□ 0.86
CDH23Q9H251 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDH23Q9H251 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDH23Q9H251 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CDH23Q9H251 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.39■□□□□ 0.85
CDH23Q9H251 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
CDH23Q9H251 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH23Q9H251 Z83836.1-201ENST00000624605 1642 ntBASIC20.39■□□□□ 0.85
CDH23Q9H251 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDH23Q9H251 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
CDH23Q9H251 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CDH23Q9H251 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH23Q9H251 TSPY22P-201ENST00000427496 604 ntBASIC20.38■□□□□ 0.85
CDH23Q9H251 PGAM5P1-201ENST00000518923 814 ntBASIC20.38■□□□□ 0.85
CDH23Q9H251 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.38■□□□□ 0.85
CDH23Q9H251 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.38■□□□□ 0.85
CDH23Q9H251 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.38■□□□□ 0.85
CDH23Q9H251 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CDH23Q9H251 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.38■□□□□ 0.85
CDH23Q9H251 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH23Q9H251 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH23Q9H251 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.38■□□□□ 0.85
CDH23Q9H251 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC20.38■□□□□ 0.85
CDH23Q9H251 AC138894.3-201ENST00000603787 634 ntBASIC20.38■□□□□ 0.85
CDH23Q9H251 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDH23Q9H251 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
CDH23Q9H251 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.38■□□□□ 0.85
CDH23Q9H251 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.38■□□□□ 0.85
CDH23Q9H251 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms