Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
POLR1EQ9GZS1 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.47■□□□□ 0.71
POLR1EQ9GZS1 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
POLR1EQ9GZS1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
POLR1EQ9GZS1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
POLR1EQ9GZS1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.47■□□□□ 0.71
POLR1EQ9GZS1 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
POLR1EQ9GZS1 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR1EQ9GZS1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
POLR1EQ9GZS1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.46■□□□□ 0.71
POLR1EQ9GZS1 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
POLR1EQ9GZS1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR1EQ9GZS1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.46■□□□□ 0.71
POLR1EQ9GZS1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
POLR1EQ9GZS1 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.46■□□□□ 0.71
POLR1EQ9GZS1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.46■□□□□ 0.71
POLR1EQ9GZS1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR1EQ9GZS1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR1EQ9GZS1 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR1EQ9GZS1 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
POLR1EQ9GZS1 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.46■□□□□ 0.71
POLR1EQ9GZS1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.46■□□□□ 0.71
POLR1EQ9GZS1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.46■□□□□ 0.71
POLR1EQ9GZS1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.46■□□□□ 0.71
POLR1EQ9GZS1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
POLR1EQ9GZS1 MIR6786-201ENST00000616843 113 ntBASIC19.46■□□□□ 0.71
POLR1EQ9GZS1 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.46■□□□□ 0.71
POLR1EQ9GZS1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
POLR1EQ9GZS1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR1EQ9GZS1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR1EQ9GZS1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR1EQ9GZS1 FSCN1P1-201ENST00000568912 1481 ntBASIC19.46■□□□□ 0.71
POLR1EQ9GZS1 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
POLR1EQ9GZS1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
POLR1EQ9GZS1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.46■□□□□ 0.71
POLR1EQ9GZS1 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
POLR1EQ9GZS1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
POLR1EQ9GZS1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
POLR1EQ9GZS1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR1EQ9GZS1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
POLR1EQ9GZS1 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR1EQ9GZS1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR1EQ9GZS1 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR1EQ9GZS1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR1EQ9GZS1 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR1EQ9GZS1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
POLR1EQ9GZS1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.45■□□□□ 0.7
POLR1EQ9GZS1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
POLR1EQ9GZS1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
POLR1EQ9GZS1 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
POLR1EQ9GZS1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.45■□□□□ 0.7
POLR1EQ9GZS1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.45■□□□□ 0.7
POLR1EQ9GZS1 AL355355.2-201ENST00000442321 338 ntBASIC19.45■□□□□ 0.7
POLR1EQ9GZS1 B3GAT3P1-201ENST00000471720 806 ntBASIC19.45■□□□□ 0.7
POLR1EQ9GZS1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR1EQ9GZS1 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.45■□□□□ 0.7
POLR1EQ9GZS1 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.45■□□□□ 0.7
POLR1EQ9GZS1 AC026471.5-201ENST00000615068 467 ntBASIC19.45■□□□□ 0.7
POLR1EQ9GZS1 AC011298.2-201ENST00000617989 482 ntBASIC19.45■□□□□ 0.7
POLR1EQ9GZS1 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.45■□□□□ 0.7
POLR1EQ9GZS1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.45■□□□□ 0.7
POLR1EQ9GZS1 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR1EQ9GZS1 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
POLR1EQ9GZS1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.44■□□□□ 0.7
POLR1EQ9GZS1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.44■□□□□ 0.7
POLR1EQ9GZS1 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR1EQ9GZS1 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.44■□□□□ 0.7
POLR1EQ9GZS1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.44■□□□□ 0.7
POLR1EQ9GZS1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR1EQ9GZS1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR1EQ9GZS1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR1EQ9GZS1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.44■□□□□ 0.7
POLR1EQ9GZS1 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR1EQ9GZS1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
POLR1EQ9GZS1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.44■□□□□ 0.7
POLR1EQ9GZS1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.44■□□□□ 0.7
POLR1EQ9GZS1 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.44■□□□□ 0.7
POLR1EQ9GZS1 AC091390.4-202ENST00000476426 537 ntBASIC19.44■□□□□ 0.7
POLR1EQ9GZS1 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.44■□□□□ 0.7
POLR1EQ9GZS1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.44■□□□□ 0.7
POLR1EQ9GZS1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.44■□□□□ 0.7
POLR1EQ9GZS1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.44■□□□□ 0.7
POLR1EQ9GZS1 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
POLR1EQ9GZS1 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR1EQ9GZS1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.44■□□□□ 0.7
POLR1EQ9GZS1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.44■□□□□ 0.7
POLR1EQ9GZS1 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
POLR1EQ9GZS1 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR1EQ9GZS1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR1EQ9GZS1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
POLR1EQ9GZS1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR1EQ9GZS1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR1EQ9GZS1 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.43■□□□□ 0.7
POLR1EQ9GZS1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
POLR1EQ9GZS1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.43■□□□□ 0.7
POLR1EQ9GZS1 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.43■□□□□ 0.7
POLR1EQ9GZS1 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR1EQ9GZS1 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR1EQ9GZS1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
POLR1EQ9GZS1 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms