Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.5■□□□□ 0.71
COL25A1Q9BXS0 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC19.5■□□□□ 0.71
COL25A1Q9BXS0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL25A1Q9BXS0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.49■□□□□ 0.71
COL25A1Q9BXS0 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
COL25A1Q9BXS0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
COL25A1Q9BXS0 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
COL25A1Q9BXS0 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC19.49■□□□□ 0.71
COL25A1Q9BXS0 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL25A1Q9BXS0 AC132008.2-207ENST00000454517 770 ntBASIC19.49■□□□□ 0.71
COL25A1Q9BXS0 AC091607.1-201ENST00000490318 1060 ntBASIC19.49■□□□□ 0.71
COL25A1Q9BXS0 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.49■□□□□ 0.71
COL25A1Q9BXS0 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.49■□□□□ 0.71
COL25A1Q9BXS0 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC19.49■□□□□ 0.71
COL25A1Q9BXS0 AC005829.1-201ENST00000570002 483 ntBASIC19.49■□□□□ 0.71
COL25A1Q9BXS0 AC124864.1-201ENST00000623408 392 ntBASIC19.49■□□□□ 0.71
COL25A1Q9BXS0 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.49■□□□□ 0.71
COL25A1Q9BXS0 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL25A1Q9BXS0 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
COL25A1Q9BXS0 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
COL25A1Q9BXS0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.49■□□□□ 0.71
COL25A1Q9BXS0 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.49■□□□□ 0.71
COL25A1Q9BXS0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL25A1Q9BXS0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL25A1Q9BXS0 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL25A1Q9BXS0 FAM99A-202ENST00000538190 1989 ntBASIC19.48■□□□□ 0.71
COL25A1Q9BXS0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
COL25A1Q9BXS0 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.48■□□□□ 0.71
COL25A1Q9BXS0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL25A1Q9BXS0 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL25A1Q9BXS0 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.48■□□□□ 0.71
COL25A1Q9BXS0 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
COL25A1Q9BXS0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL25A1Q9BXS0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL25A1Q9BXS0 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.48■□□□□ 0.71
COL25A1Q9BXS0 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.48■□□□□ 0.71
COL25A1Q9BXS0 CNN2P11-201ENST00000429351 262 ntBASIC19.48■□□□□ 0.71
COL25A1Q9BXS0 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.48■□□□□ 0.71
COL25A1Q9BXS0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC19.48■□□□□ 0.71
COL25A1Q9BXS0 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC19.48■□□□□ 0.71
COL25A1Q9BXS0 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.48■□□□□ 0.71
COL25A1Q9BXS0 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC19.48■□□□□ 0.71
COL25A1Q9BXS0 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL25A1Q9BXS0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL25A1Q9BXS0 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
COL25A1Q9BXS0 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL25A1Q9BXS0 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL25A1Q9BXS0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
COL25A1Q9BXS0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
COL25A1Q9BXS0 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC19.47■□□□□ 0.71
COL25A1Q9BXS0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL25A1Q9BXS0 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL25A1Q9BXS0 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
COL25A1Q9BXS0 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL25A1Q9BXS0 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL25A1Q9BXS0 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC19.47■□□□□ 0.71
COL25A1Q9BXS0 AC007967.2-201ENST00000432613 625 ntBASIC19.47■□□□□ 0.71
COL25A1Q9BXS0 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC19.47■□□□□ 0.71
COL25A1Q9BXS0 FGFR3P6-201ENST00000457012 610 ntBASIC19.47■□□□□ 0.71
COL25A1Q9BXS0 YBX1P5-201ENST00000509441 847 ntBASIC19.47■□□□□ 0.71
COL25A1Q9BXS0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC19.47■□□□□ 0.71
COL25A1Q9BXS0 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.47■□□□□ 0.71
COL25A1Q9BXS0 AP001269.4-201ENST00000609611 512 ntBASIC19.47■□□□□ 0.71
COL25A1Q9BXS0 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC19.47■□□□□ 0.71
COL25A1Q9BXS0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
COL25A1Q9BXS0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL25A1Q9BXS0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.47■□□□□ 0.71
COL25A1Q9BXS0 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
COL25A1Q9BXS0 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.47■□□□□ 0.71
COL25A1Q9BXS0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC19.47■□□□□ 0.71
COL25A1Q9BXS0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
COL25A1Q9BXS0 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL25A1Q9BXS0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL25A1Q9BXS0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC19.46■□□□□ 0.71
COL25A1Q9BXS0 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.46■□□□□ 0.71
COL25A1Q9BXS0 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.46■□□□□ 0.71
COL25A1Q9BXS0 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.46■□□□□ 0.71
COL25A1Q9BXS0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL25A1Q9BXS0 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL25A1Q9BXS0 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC19.46■□□□□ 0.71
COL25A1Q9BXS0 AC009533.2-201ENST00000543664 586 ntBASIC19.46■□□□□ 0.71
COL25A1Q9BXS0 MIR4469-201ENST00000583919 79 ntBASIC19.46■□□□□ 0.71
COL25A1Q9BXS0 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
COL25A1Q9BXS0 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
COL25A1Q9BXS0 AC084346.2-201ENST00000607097 949 ntBASIC19.46■□□□□ 0.71
COL25A1Q9BXS0 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.46■□□□□ 0.71
COL25A1Q9BXS0 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
COL25A1Q9BXS0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC19.46■□□□□ 0.71
COL25A1Q9BXS0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL25A1Q9BXS0 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
COL25A1Q9BXS0 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL25A1Q9BXS0 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL25A1Q9BXS0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL25A1Q9BXS0 BEX3-201ENST00000361298 921 ntTSL 2 BASIC19.45■□□□□ 0.7
COL25A1Q9BXS0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
COL25A1Q9BXS0 AP003733.1-201ENST00000491725 852 ntBASIC19.45■□□□□ 0.7
COL25A1Q9BXS0 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
COL25A1Q9BXS0 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC19.45■□□□□ 0.7
COL25A1Q9BXS0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC19.45■□□□□ 0.7
COL25A1Q9BXS0 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms