Protein–RNA interactions for Protein: Q99624

SLC38A3, Sodium-coupled neutral amino acid transporter 3, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A3Q99624 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC38A3Q99624 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC38A3Q99624 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SLC38A3Q99624 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC38A3Q99624 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC38A3Q99624 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.59■□□□□ 0.57
SLC38A3Q99624 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC38A3Q99624 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SLC38A3Q99624 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC38A3Q99624 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC38A3Q99624 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC38A3Q99624 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC38A3Q99624 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC38A3Q99624 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SLC38A3Q99624 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC38A3Q99624 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC38A3Q99624 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC38A3Q99624 CA15P1-201ENST00000481698 905 ntBASIC18.59■□□□□ 0.57
SLC38A3Q99624 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.59■□□□□ 0.57
SLC38A3Q99624 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC38A3Q99624 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC38A3Q99624 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.59■□□□□ 0.57
SLC38A3Q99624 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC38A3Q99624 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC38A3Q99624 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC38A3Q99624 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC38A3Q99624 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SLC38A3Q99624 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC38A3Q99624 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC38A3Q99624 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC38A3Q99624 AC092338.2-201ENST00000568827 1415 ntBASIC18.58■□□□□ 0.57
SLC38A3Q99624 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
SLC38A3Q99624 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC38A3Q99624 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC38A3Q99624 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SLC38A3Q99624 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC38A3Q99624 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC38A3Q99624 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.58■□□□□ 0.57
SLC38A3Q99624 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.58■□□□□ 0.57
SLC38A3Q99624 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC38A3Q99624 ZNF815P-204ENST00000434898 1737 ntBASIC18.58■□□□□ 0.57
SLC38A3Q99624 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC38A3Q99624 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC18.58■□□□□ 0.57
SLC38A3Q99624 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC38A3Q99624 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SLC38A3Q99624 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SLC38A3Q99624 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC38A3Q99624 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
SLC38A3Q99624 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
SLC38A3Q99624 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.58■□□□□ 0.56
SLC38A3Q99624 BX664615.1-201ENST00000443558 458 ntBASIC18.58■□□□□ 0.56
SLC38A3Q99624 AC104076.2-201ENST00000448912 469 ntBASIC18.58■□□□□ 0.56
SLC38A3Q99624 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.58■□□□□ 0.56
SLC38A3Q99624 DUX4L26-201ENST00000489078 1255 ntBASIC18.58■□□□□ 0.56
SLC38A3Q99624 PRSS44-201ENST00000515154 1146 ntBASIC18.58■□□□□ 0.56
SLC38A3Q99624 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.58■□□□□ 0.56
SLC38A3Q99624 AL353719.1-201ENST00000566847 864 ntBASIC18.58■□□□□ 0.56
SLC38A3Q99624 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.58■□□□□ 0.56
SLC38A3Q99624 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC18.58■□□□□ 0.56
SLC38A3Q99624 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.58■□□□□ 0.56
SLC38A3Q99624 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SLC38A3Q99624 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SLC38A3Q99624 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SLC38A3Q99624 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SLC38A3Q99624 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC38A3Q99624 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.57■□□□□ 0.56
SLC38A3Q99624 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC38A3Q99624 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC38A3Q99624 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
SLC38A3Q99624 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
SLC38A3Q99624 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC38A3Q99624 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC38A3Q99624 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
SLC38A3Q99624 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.57■□□□□ 0.56
SLC38A3Q99624 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC38A3Q99624 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SLC38A3Q99624 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC38A3Q99624 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC38A3Q99624 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.57■□□□□ 0.56
SLC38A3Q99624 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.57■□□□□ 0.56
SLC38A3Q99624 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC38A3Q99624 AL023803.3-201ENST00000615559 522 ntBASIC18.57■□□□□ 0.56
SLC38A3Q99624 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.57■□□□□ 0.56
SLC38A3Q99624 AC104417.2-201ENST00000562989 1793 ntBASIC18.57■□□□□ 0.56
SLC38A3Q99624 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC38A3Q99624 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC38A3Q99624 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC38A3Q99624 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC38A3Q99624 KRT8P11-201ENST00000409686 1436 ntBASIC18.57■□□□□ 0.56
SLC38A3Q99624 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC38A3Q99624 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC38A3Q99624 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC38A3Q99624 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SLC38A3Q99624 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC38A3Q99624 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC38A3Q99624 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC38A3Q99624 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC38A3Q99624 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.56■□□□□ 0.56
SLC38A3Q99624 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SLC38A3Q99624 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms