Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
CDCA3Q99618 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDCA3Q99618 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.99■□□□□ 0.79
CDCA3Q99618 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
CDCA3Q99618 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDCA3Q99618 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
CDCA3Q99618 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDCA3Q99618 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
CDCA3Q99618 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
CDCA3Q99618 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDCA3Q99618 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDCA3Q99618 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
CDCA3Q99618 AC104417.2-201ENST00000562989 1793 ntBASIC19.98■□□□□ 0.79
CDCA3Q99618 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDCA3Q99618 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDCA3Q99618 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDCA3Q99618 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDCA3Q99618 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.98■□□□□ 0.79
CDCA3Q99618 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDCA3Q99618 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDCA3Q99618 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.98■□□□□ 0.79
CDCA3Q99618 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
CDCA3Q99618 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDCA3Q99618 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.98■□□□□ 0.79
CDCA3Q99618 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDCA3Q99618 PVRIG2P-201ENST00000435460 978 ntBASIC19.98■□□□□ 0.79
CDCA3Q99618 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDCA3Q99618 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.98■□□□□ 0.79
CDCA3Q99618 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.98■□□□□ 0.79
CDCA3Q99618 MIR3180-5-201ENST00000583743 153 ntBASIC19.98■□□□□ 0.79
CDCA3Q99618 IFNL4P1-201ENST00000607083 540 ntBASIC19.98■□□□□ 0.79
CDCA3Q99618 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDCA3Q99618 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
CDCA3Q99618 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDCA3Q99618 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDCA3Q99618 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CDCA3Q99618 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDCA3Q99618 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.98■□□□□ 0.79
CDCA3Q99618 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
CDCA3Q99618 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.97■□□□□ 0.79
CDCA3Q99618 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDCA3Q99618 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDCA3Q99618 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC19.97■□□□□ 0.79
CDCA3Q99618 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDCA3Q99618 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CDCA3Q99618 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CDCA3Q99618 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDCA3Q99618 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDCA3Q99618 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
CDCA3Q99618 AL023284.2-201ENST00000405850 579 ntBASIC19.97■□□□□ 0.79
CDCA3Q99618 TSPY19P-201ENST00000418461 509 ntBASIC19.97■□□□□ 0.79
CDCA3Q99618 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CDCA3Q99618 TSPY18P-201ENST00000441642 509 ntBASIC19.97■□□□□ 0.79
CDCA3Q99618 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.97■□□□□ 0.79
CDCA3Q99618 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDCA3Q99618 AL121772.3-201ENST00000610840 674 ntBASIC19.97■□□□□ 0.79
CDCA3Q99618 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.97■□□□□ 0.79
CDCA3Q99618 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDCA3Q99618 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDCA3Q99618 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDCA3Q99618 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
CDCA3Q99618 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDCA3Q99618 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDCA3Q99618 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDCA3Q99618 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDCA3Q99618 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.96■□□□□ 0.79
CDCA3Q99618 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDCA3Q99618 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDCA3Q99618 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.96■□□□□ 0.79
CDCA3Q99618 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDCA3Q99618 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CDCA3Q99618 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDCA3Q99618 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDCA3Q99618 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CDCA3Q99618 MIR662-201ENST00000384847 95 ntBASIC19.96■□□□□ 0.79
CDCA3Q99618 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
CDCA3Q99618 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDCA3Q99618 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.96■□□□□ 0.79
CDCA3Q99618 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDCA3Q99618 LINC01711-201ENST00000598340 967 ntBASIC19.96■□□□□ 0.79
CDCA3Q99618 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.96■□□□□ 0.79
CDCA3Q99618 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.96■□□□□ 0.79
CDCA3Q99618 KRT18P1-202ENST00000452408 1331 ntBASIC19.96■□□□□ 0.79
CDCA3Q99618 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC19.96■□□□□ 0.79
CDCA3Q99618 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDCA3Q99618 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDCA3Q99618 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDCA3Q99618 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDCA3Q99618 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDCA3Q99618 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
CDCA3Q99618 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
CDCA3Q99618 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
CDCA3Q99618 AC036111.1-201ENST00000533973 1582 ntBASIC19.95■□□□□ 0.78
CDCA3Q99618 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.95■□□□□ 0.78
CDCA3Q99618 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CDCA3Q99618 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA3Q99618 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA3Q99618 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA3Q99618 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDCA3Q99618 DRAXINP1-201ENST00000437611 948 ntBASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms