Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 TSPY23P-201ENST00000440136 739 ntBASIC15.98■□□□□ 0.15
GAFA1Q96PS6 AC008040.2-201ENST00000461049 708 ntBASIC15.98■□□□□ 0.15
GAFA1Q96PS6 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GAFA1Q96PS6 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.98■□□□□ 0.15
GAFA1Q96PS6 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC15.98■□□□□ 0.15
GAFA1Q96PS6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.98■□□□□ 0.15
GAFA1Q96PS6 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
GAFA1Q96PS6 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.98■□□□□ 0.15
GAFA1Q96PS6 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.98■□□□□ 0.15
GAFA1Q96PS6 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC15.98■□□□□ 0.15
GAFA1Q96PS6 DECR2-212ENST00000627716 352 ntTSL 2 BASIC15.98■□□□□ 0.15
GAFA1Q96PS6 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GAFA1Q96PS6 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.98■□□□□ 0.15
GAFA1Q96PS6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC15.98■□□□□ 0.15
GAFA1Q96PS6 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
GAFA1Q96PS6 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GAFA1Q96PS6 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC15.97■□□□□ 0.15
GAFA1Q96PS6 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
GAFA1Q96PS6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC15.97■□□□□ 0.15
GAFA1Q96PS6 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
GAFA1Q96PS6 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.97■□□□□ 0.15
GAFA1Q96PS6 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.97■□□□□ 0.15
GAFA1Q96PS6 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
GAFA1Q96PS6 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC15.97■□□□□ 0.15
GAFA1Q96PS6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.97■□□□□ 0.15
GAFA1Q96PS6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.97■□□□□ 0.15
GAFA1Q96PS6 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC15.97■□□□□ 0.15
GAFA1Q96PS6 AC116562.2-201ENST00000507042 360 ntBASIC15.97■□□□□ 0.15
GAFA1Q96PS6 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.97■□□□□ 0.15
GAFA1Q96PS6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.97■□□□□ 0.15
GAFA1Q96PS6 MIR4785-201ENST00000585005 73 ntBASIC15.97■□□□□ 0.15
GAFA1Q96PS6 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.97■□□□□ 0.15
GAFA1Q96PS6 REXO1L10P-201ENST00000615707 1290 ntBASIC15.97■□□□□ 0.15
GAFA1Q96PS6 AC130371.2-201ENST00000619443 611 ntBASIC15.97■□□□□ 0.15
GAFA1Q96PS6 REXO1L12P-201ENST00000622156 912 ntBASIC15.97■□□□□ 0.15
GAFA1Q96PS6 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GAFA1Q96PS6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC15.97■□□□□ 0.15
GAFA1Q96PS6 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GAFA1Q96PS6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC15.97■□□□□ 0.15
GAFA1Q96PS6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GAFA1Q96PS6 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GAFA1Q96PS6 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.97■□□□□ 0.15
GAFA1Q96PS6 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
GAFA1Q96PS6 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GAFA1Q96PS6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
GAFA1Q96PS6 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GAFA1Q96PS6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GAFA1Q96PS6 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC15.96■□□□□ 0.15
GAFA1Q96PS6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC15.96■□□□□ 0.15
GAFA1Q96PS6 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
GAFA1Q96PS6 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.96■□□□□ 0.15
GAFA1Q96PS6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GAFA1Q96PS6 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
GAFA1Q96PS6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
GAFA1Q96PS6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
GAFA1Q96PS6 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
GAFA1Q96PS6 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
GAFA1Q96PS6 PTGES2-AS1-201ENST00000443493 2100 ntBASIC15.96■□□□□ 0.15
GAFA1Q96PS6 FAM207BP-201ENST00000447172 505 ntBASIC15.96■□□□□ 0.15
GAFA1Q96PS6 AP003071.4-201ENST00000562276 1284 ntBASIC15.96■□□□□ 0.15
GAFA1Q96PS6 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC15.96■□□□□ 0.15
GAFA1Q96PS6 MIR4497-201ENST00000583208 89 ntBASIC15.96■□□□□ 0.15
GAFA1Q96PS6 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC15.96■□□□□ 0.15
GAFA1Q96PS6 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
GAFA1Q96PS6 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
GAFA1Q96PS6 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GAFA1Q96PS6 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.96■□□□□ 0.15
GAFA1Q96PS6 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
GAFA1Q96PS6 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
GAFA1Q96PS6 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC15.96■□□□□ 0.14
GAFA1Q96PS6 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC15.96■□□□□ 0.14
GAFA1Q96PS6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.95■□□□□ 0.14
GAFA1Q96PS6 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GAFA1Q96PS6 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC15.95■□□□□ 0.14
GAFA1Q96PS6 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
GAFA1Q96PS6 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GAFA1Q96PS6 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GAFA1Q96PS6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
GAFA1Q96PS6 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
GAFA1Q96PS6 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GAFA1Q96PS6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GAFA1Q96PS6 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
GAFA1Q96PS6 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GAFA1Q96PS6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
GAFA1Q96PS6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GAFA1Q96PS6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.95■□□□□ 0.14
GAFA1Q96PS6 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC15.95■□□□□ 0.14
GAFA1Q96PS6 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC15.95■□□□□ 0.14
GAFA1Q96PS6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
GAFA1Q96PS6 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.95■□□□□ 0.14
GAFA1Q96PS6 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.95■□□□□ 0.14
GAFA1Q96PS6 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GAFA1Q96PS6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
GAFA1Q96PS6 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GAFA1Q96PS6 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GAFA1Q96PS6 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
GAFA1Q96PS6 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC15.95■□□□□ 0.14
GAFA1Q96PS6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC15.95■□□□□ 0.14
GAFA1Q96PS6 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GAFA1Q96PS6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms