Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.4■□□□□ 0.86
ZNF558Q96NG5 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.4■□□□□ 0.86
ZNF558Q96NG5 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ZNF558Q96NG5 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF558Q96NG5 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.4■□□□□ 0.86
ZNF558Q96NG5 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZNF558Q96NG5 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.86
ZNF558Q96NG5 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
ZNF558Q96NG5 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
ZNF558Q96NG5 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
ZNF558Q96NG5 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
ZNF558Q96NG5 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC20.39■□□□□ 0.86
ZNF558Q96NG5 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.39■□□□□ 0.86
ZNF558Q96NG5 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.39■□□□□ 0.86
ZNF558Q96NG5 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF558Q96NG5 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.39■□□□□ 0.85
ZNF558Q96NG5 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF558Q96NG5 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC20.39■□□□□ 0.85
ZNF558Q96NG5 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
ZNF558Q96NG5 AL450487.1-201ENST00000426799 995 ntBASIC20.39■□□□□ 0.85
ZNF558Q96NG5 TSPY21P-201ENST00000433481 731 ntBASIC20.39■□□□□ 0.85
ZNF558Q96NG5 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC20.39■□□□□ 0.85
ZNF558Q96NG5 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.39■□□□□ 0.85
ZNF558Q96NG5 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.39■□□□□ 0.85
ZNF558Q96NG5 CLEC4GP1-201ENST00000596555 870 ntBASIC20.39■□□□□ 0.85
ZNF558Q96NG5 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.39■□□□□ 0.85
ZNF558Q96NG5 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF558Q96NG5 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF558Q96NG5 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.39■□□□□ 0.85
ZNF558Q96NG5 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF558Q96NG5 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.39■□□□□ 0.85
ZNF558Q96NG5 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
ZNF558Q96NG5 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF558Q96NG5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ZNF558Q96NG5 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF558Q96NG5 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF558Q96NG5 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF558Q96NG5 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF558Q96NG5 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF558Q96NG5 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.38■□□□□ 0.85
ZNF558Q96NG5 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF558Q96NG5 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF558Q96NG5 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ZNF558Q96NG5 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
ZNF558Q96NG5 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF558Q96NG5 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF558Q96NG5 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF558Q96NG5 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF558Q96NG5 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF558Q96NG5 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF558Q96NG5 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZNF558Q96NG5 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.38■□□□□ 0.85
ZNF558Q96NG5 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF558Q96NG5 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF558Q96NG5 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF558Q96NG5 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF558Q96NG5 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF558Q96NG5 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF558Q96NG5 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.37■□□□□ 0.85
ZNF558Q96NG5 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF558Q96NG5 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF558Q96NG5 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF558Q96NG5 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF558Q96NG5 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF558Q96NG5 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.37■□□□□ 0.85
ZNF558Q96NG5 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.37■□□□□ 0.85
ZNF558Q96NG5 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC20.37■□□□□ 0.85
ZNF558Q96NG5 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.37■□□□□ 0.85
ZNF558Q96NG5 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF558Q96NG5 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF558Q96NG5 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF558Q96NG5 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF558Q96NG5 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF558Q96NG5 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF558Q96NG5 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF558Q96NG5 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZNF558Q96NG5 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
ZNF558Q96NG5 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF558Q96NG5 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF558Q96NG5 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF558Q96NG5 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
ZNF558Q96NG5 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF558Q96NG5 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF558Q96NG5 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF558Q96NG5 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.36■□□□□ 0.85
ZNF558Q96NG5 AC034232.1-201ENST00000506026 1064 ntBASIC20.36■□□□□ 0.85
ZNF558Q96NG5 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.36■□□□□ 0.85
ZNF558Q96NG5 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.36■□□□□ 0.85
ZNF558Q96NG5 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.36■□□□□ 0.85
ZNF558Q96NG5 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF558Q96NG5 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF558Q96NG5 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
ZNF558Q96NG5 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
ZNF558Q96NG5 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF558Q96NG5 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.36■□□□□ 0.85
ZNF558Q96NG5 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
ZNF558Q96NG5 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.35■□□□□ 0.85
ZNF558Q96NG5 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ZNF558Q96NG5 AC099778.1-201ENST00000568593 1911 ntBASIC20.35■□□□□ 0.85
ZNF558Q96NG5 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms