Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CALR3Q96L12 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.29■□□□□ 0.84
CALR3Q96L12 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.29■□□□□ 0.84
CALR3Q96L12 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CALR3Q96L12 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.29■□□□□ 0.84
CALR3Q96L12 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.29■□□□□ 0.84
CALR3Q96L12 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.29■□□□□ 0.84
CALR3Q96L12 PNMA6B-201ENST00000538162 1200 ntBASIC20.29■□□□□ 0.84
CALR3Q96L12 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.29■□□□□ 0.84
CALR3Q96L12 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CALR3Q96L12 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CALR3Q96L12 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.29■□□□□ 0.84
CALR3Q96L12 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CALR3Q96L12 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CALR3Q96L12 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
CALR3Q96L12 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CALR3Q96L12 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CALR3Q96L12 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
CALR3Q96L12 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
CALR3Q96L12 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CALR3Q96L12 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CALR3Q96L12 AC106820.2-201ENST00000563775 3264 ntBASIC20.28■□□□□ 0.84
CALR3Q96L12 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CALR3Q96L12 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CALR3Q96L12 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CALR3Q96L12 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CALR3Q96L12 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CALR3Q96L12 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CALR3Q96L12 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CALR3Q96L12 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CALR3Q96L12 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CALR3Q96L12 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.28■□□□□ 0.84
CALR3Q96L12 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CALR3Q96L12 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.28■□□□□ 0.84
CALR3Q96L12 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.28■□□□□ 0.84
CALR3Q96L12 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.28■□□□□ 0.84
CALR3Q96L12 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CALR3Q96L12 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CALR3Q96L12 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
CALR3Q96L12 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
CALR3Q96L12 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.28■□□□□ 0.84
CALR3Q96L12 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CALR3Q96L12 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
CALR3Q96L12 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CALR3Q96L12 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CALR3Q96L12 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CALR3Q96L12 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.27■□□□□ 0.84
CALR3Q96L12 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CALR3Q96L12 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CALR3Q96L12 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CALR3Q96L12 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CALR3Q96L12 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
CALR3Q96L12 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.27■□□□□ 0.84
CALR3Q96L12 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CALR3Q96L12 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CALR3Q96L12 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CALR3Q96L12 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CALR3Q96L12 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.27■□□□□ 0.84
CALR3Q96L12 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.27■□□□□ 0.84
CALR3Q96L12 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.27■□□□□ 0.84
CALR3Q96L12 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.27■□□□□ 0.84
CALR3Q96L12 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC20.27■□□□□ 0.84
CALR3Q96L12 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CALR3Q96L12 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CALR3Q96L12 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.27■□□□□ 0.83
CALR3Q96L12 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CALR3Q96L12 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CALR3Q96L12 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.27■□□□□ 0.83
CALR3Q96L12 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CALR3Q96L12 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CALR3Q96L12 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.26■□□□□ 0.83
CALR3Q96L12 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
CALR3Q96L12 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.26■□□□□ 0.83
CALR3Q96L12 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CALR3Q96L12 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
CALR3Q96L12 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CALR3Q96L12 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
CALR3Q96L12 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CALR3Q96L12 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CALR3Q96L12 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CALR3Q96L12 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CALR3Q96L12 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CALR3Q96L12 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CALR3Q96L12 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CALR3Q96L12 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CALR3Q96L12 TSPY21P-201ENST00000433481 731 ntBASIC20.26■□□□□ 0.83
CALR3Q96L12 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.26■□□□□ 0.83
CALR3Q96L12 TSPY6P-201ENST00000448518 926 ntBASIC20.26■□□□□ 0.83
CALR3Q96L12 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.26■□□□□ 0.83
CALR3Q96L12 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.26■□□□□ 0.83
CALR3Q96L12 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.26■□□□□ 0.83
CALR3Q96L12 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC20.26■□□□□ 0.83
CALR3Q96L12 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CALR3Q96L12 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CALR3Q96L12 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.26■□□□□ 0.83
CALR3Q96L12 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CALR3Q96L12 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CALR3Q96L12 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.26■□□□□ 0.83
CALR3Q96L12 AC135050.7-201ENST00000624508 2218 ntBASIC20.26■□□□□ 0.83
CALR3Q96L12 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms