Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM11Q96F44 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
TRIM11Q96F44 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM11Q96F44 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM11Q96F44 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.29■□□□□ 0.84
TRIM11Q96F44 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM11Q96F44 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM11Q96F44 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TRIM11Q96F44 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC20.29■□□□□ 0.84
TRIM11Q96F44 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM11Q96F44 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM11Q96F44 AC239809.2-201ENST00000415381 517 ntBASIC20.29■□□□□ 0.84
TRIM11Q96F44 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM11Q96F44 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM11Q96F44 MMAB-206ENST00000540016 945 ntTSL 3 BASIC20.29■□□□□ 0.84
TRIM11Q96F44 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.29■□□□□ 0.84
TRIM11Q96F44 HLA-A-209ENST00000638375 975 ntBASIC20.29■□□□□ 0.84
TRIM11Q96F44 AC006333.2-201ENST00000607957 2099 ntBASIC20.29■□□□□ 0.84
TRIM11Q96F44 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.29■□□□□ 0.84
TRIM11Q96F44 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
TRIM11Q96F44 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.29■□□□□ 0.84
TRIM11Q96F44 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
TRIM11Q96F44 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM11Q96F44 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM11Q96F44 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.28■□□□□ 0.84
TRIM11Q96F44 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.28■□□□□ 0.84
TRIM11Q96F44 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM11Q96F44 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
TRIM11Q96F44 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
TRIM11Q96F44 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.28■□□□□ 0.84
TRIM11Q96F44 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.28■□□□□ 0.84
TRIM11Q96F44 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
TRIM11Q96F44 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM11Q96F44 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.28■□□□□ 0.84
TRIM11Q96F44 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC20.28■□□□□ 0.84
TRIM11Q96F44 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM11Q96F44 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM11Q96F44 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.28■□□□□ 0.84
TRIM11Q96F44 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
TRIM11Q96F44 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
TRIM11Q96F44 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TRIM11Q96F44 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRIM11Q96F44 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
TRIM11Q96F44 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM11Q96F44 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.27■□□□□ 0.84
TRIM11Q96F44 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM11Q96F44 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM11Q96F44 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TRIM11Q96F44 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM11Q96F44 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM11Q96F44 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM11Q96F44 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM11Q96F44 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
TRIM11Q96F44 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRIM11Q96F44 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
TRIM11Q96F44 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
TRIM11Q96F44 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC20.27■□□□□ 0.84
TRIM11Q96F44 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC20.27■□□□□ 0.84
TRIM11Q96F44 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TRIM11Q96F44 CROCCP3-202ENST00000420820 1947 ntBASIC20.27■□□□□ 0.84
TRIM11Q96F44 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TRIM11Q96F44 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
TRIM11Q96F44 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.27■□□□□ 0.83
TRIM11Q96F44 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.26■□□□□ 0.83
TRIM11Q96F44 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM11Q96F44 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
TRIM11Q96F44 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM11Q96F44 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM11Q96F44 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM11Q96F44 AL138781.2-201ENST00000617896 1843 ntBASIC20.26■□□□□ 0.83
TRIM11Q96F44 KRT16P5-201ENST00000455284 522 ntBASIC20.26■□□□□ 0.83
TRIM11Q96F44 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.26■□□□□ 0.83
TRIM11Q96F44 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM11Q96F44 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM11Q96F44 AC233263.1-201ENST00000578059 224 ntBASIC20.26■□□□□ 0.83
TRIM11Q96F44 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC20.26■□□□□ 0.83
TRIM11Q96F44 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.26■□□□□ 0.83
TRIM11Q96F44 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.26■□□□□ 0.83
TRIM11Q96F44 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM11Q96F44 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TRIM11Q96F44 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.26■□□□□ 0.83
TRIM11Q96F44 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRIM11Q96F44 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM11Q96F44 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TRIM11Q96F44 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM11Q96F44 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TRIM11Q96F44 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.25■□□□□ 0.83
TRIM11Q96F44 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.25■□□□□ 0.83
TRIM11Q96F44 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.25■□□□□ 0.83
TRIM11Q96F44 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM11Q96F44 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.25■□□□□ 0.83
TRIM11Q96F44 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM11Q96F44 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM11Q96F44 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.25■□□□□ 0.83
TRIM11Q96F44 ESRRAP1-201ENST00000400596 1257 ntBASIC20.25■□□□□ 0.83
TRIM11Q96F44 KRASP1-201ENST00000407852 552 ntBASIC20.25■□□□□ 0.83
TRIM11Q96F44 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.25■□□□□ 0.83
TRIM11Q96F44 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRIM11Q96F44 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.25■□□□□ 0.83
TRIM11Q96F44 AL023875.1-201ENST00000640777 796 ntBASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms