Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SPDL1Q96EA4 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPDL1Q96EA4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPDL1Q96EA4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPDL1Q96EA4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPDL1Q96EA4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.89■□□□□ 0.61
SPDL1Q96EA4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPDL1Q96EA4 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
SPDL1Q96EA4 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPDL1Q96EA4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.88■□□□□ 0.61
SPDL1Q96EA4 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SPDL1Q96EA4 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SPDL1Q96EA4 MIR638-201ENST00000385237 100 ntBASIC18.88■□□□□ 0.61
SPDL1Q96EA4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC18.88■□□□□ 0.61
SPDL1Q96EA4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
SPDL1Q96EA4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SPDL1Q96EA4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPDL1Q96EA4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SPDL1Q96EA4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPDL1Q96EA4 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.88■□□□□ 0.61
SPDL1Q96EA4 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPDL1Q96EA4 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SPDL1Q96EA4 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SPDL1Q96EA4 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPDL1Q96EA4 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SPDL1Q96EA4 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPDL1Q96EA4 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SPDL1Q96EA4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.88■□□□□ 0.61
SPDL1Q96EA4 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SPDL1Q96EA4 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SPDL1Q96EA4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
SPDL1Q96EA4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.87■□□□□ 0.61
SPDL1Q96EA4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPDL1Q96EA4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPDL1Q96EA4 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPDL1Q96EA4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPDL1Q96EA4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPDL1Q96EA4 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SPDL1Q96EA4 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
SPDL1Q96EA4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPDL1Q96EA4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
SPDL1Q96EA4 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.87■□□□□ 0.61
SPDL1Q96EA4 LINC01465-201ENST00000408887 1940 ntBASIC18.87■□□□□ 0.61
SPDL1Q96EA4 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.87■□□□□ 0.61
SPDL1Q96EA4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC18.87■□□□□ 0.61
SPDL1Q96EA4 AC007322.4-201ENST00000509611 723 ntBASIC18.87■□□□□ 0.61
SPDL1Q96EA4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPDL1Q96EA4 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.87■□□□□ 0.61
SPDL1Q96EA4 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPDL1Q96EA4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SPDL1Q96EA4 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPDL1Q96EA4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SPDL1Q96EA4 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SPDL1Q96EA4 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPDL1Q96EA4 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.86■□□□□ 0.61
SPDL1Q96EA4 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPDL1Q96EA4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPDL1Q96EA4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPDL1Q96EA4 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC18.86■□□□□ 0.61
SPDL1Q96EA4 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPDL1Q96EA4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.86■□□□□ 0.61
SPDL1Q96EA4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPDL1Q96EA4 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPDL1Q96EA4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPDL1Q96EA4 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SPDL1Q96EA4 MCRIP2P1-201ENST00000394346 511 ntBASIC18.86■□□□□ 0.61
SPDL1Q96EA4 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SPDL1Q96EA4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPDL1Q96EA4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SPDL1Q96EA4 AC013268.1-206ENST00000638368 961 ntBASIC18.86■□□□□ 0.61
SPDL1Q96EA4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
SPDL1Q96EA4 AC112229.1-201ENST00000639295 961 ntBASIC18.86■□□□□ 0.61
SPDL1Q96EA4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPDL1Q96EA4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.86■□□□□ 0.61
SPDL1Q96EA4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPDL1Q96EA4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPDL1Q96EA4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPDL1Q96EA4 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SPDL1Q96EA4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPDL1Q96EA4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.86■□□□□ 0.61
SPDL1Q96EA4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SPDL1Q96EA4 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SPDL1Q96EA4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
SPDL1Q96EA4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SPDL1Q96EA4 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.86■□□□□ 0.61
SPDL1Q96EA4 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.86■□□□□ 0.61
SPDL1Q96EA4 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.86■□□□□ 0.61
SPDL1Q96EA4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPDL1Q96EA4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SPDL1Q96EA4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
SPDL1Q96EA4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPDL1Q96EA4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPDL1Q96EA4 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SPDL1Q96EA4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPDL1Q96EA4 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPDL1Q96EA4 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SPDL1Q96EA4 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.85■□□□□ 0.61
SPDL1Q96EA4 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.85■□□□□ 0.61
SPDL1Q96EA4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.85■□□□□ 0.61
SPDL1Q96EA4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms