Protein–RNA interactions for Protein: Q93009

USP7, Ubiquitin carboxyl-terminal hydrolase 7, humanhuman

Predictions only

Length 1,102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP7Q93009 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.94■□□□□ 0.62
USP7Q93009 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.94■□□□□ 0.62
USP7Q93009 AL445228.2-201ENST00000605589 952 ntBASIC18.94■□□□□ 0.62
USP7Q93009 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.94■□□□□ 0.62
USP7Q93009 CR392000.1-201ENST00000624770 1228 ntBASIC18.94■□□□□ 0.62
USP7Q93009 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP7Q93009 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP7Q93009 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.94■□□□□ 0.62
USP7Q93009 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.94■□□□□ 0.62
USP7Q93009 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
USP7Q93009 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
USP7Q93009 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.93■□□□□ 0.62
USP7Q93009 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP7Q93009 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
USP7Q93009 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
USP7Q93009 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.93■□□□□ 0.62
USP7Q93009 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP7Q93009 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP7Q93009 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP7Q93009 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.93■□□□□ 0.62
USP7Q93009 AC145285.6-201ENST00000604632 637 ntBASIC18.93■□□□□ 0.62
USP7Q93009 AC005363.2-201ENST00000618631 242 ntBASIC18.93■□□□□ 0.62
USP7Q93009 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP7Q93009 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP7Q93009 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.93■□□□□ 0.62
USP7Q93009 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP7Q93009 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
USP7Q93009 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
USP7Q93009 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.92■□□□□ 0.62
USP7Q93009 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP7Q93009 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
USP7Q93009 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP7Q93009 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP7Q93009 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
USP7Q93009 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.92■□□□□ 0.62
USP7Q93009 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP7Q93009 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
USP7Q93009 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.92■□□□□ 0.62
USP7Q93009 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP7Q93009 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.92■□□□□ 0.62
USP7Q93009 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
USP7Q93009 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP7Q93009 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.92■□□□□ 0.62
USP7Q93009 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.92■□□□□ 0.62
USP7Q93009 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.92■□□□□ 0.62
USP7Q93009 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
USP7Q93009 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.92■□□□□ 0.62
USP7Q93009 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.92■□□□□ 0.62
USP7Q93009 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.92■□□□□ 0.62
USP7Q93009 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP7Q93009 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
USP7Q93009 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP7Q93009 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP7Q93009 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP7Q93009 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP7Q93009 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
USP7Q93009 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP7Q93009 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP7Q93009 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.91■□□□□ 0.62
USP7Q93009 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.91■□□□□ 0.62
USP7Q93009 TFP1-202ENST00000475455 1573 ntBASIC18.91■□□□□ 0.62
USP7Q93009 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.91■□□□□ 0.62
USP7Q93009 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.91■□□□□ 0.62
USP7Q93009 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.91■□□□□ 0.62
USP7Q93009 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.91■□□□□ 0.62
USP7Q93009 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP7Q93009 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.91■□□□□ 0.62
USP7Q93009 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP7Q93009 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.91■□□□□ 0.62
USP7Q93009 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP7Q93009 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
USP7Q93009 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.91■□□□□ 0.62
USP7Q93009 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP7Q93009 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC18.91■□□□□ 0.62
USP7Q93009 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP7Q93009 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.91■□□□□ 0.62
USP7Q93009 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP7Q93009 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
USP7Q93009 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
USP7Q93009 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP7Q93009 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.9■□□□□ 0.62
USP7Q93009 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.9■□□□□ 0.62
USP7Q93009 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.9■□□□□ 0.62
USP7Q93009 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
USP7Q93009 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.9■□□□□ 0.62
USP7Q93009 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP7Q93009 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
USP7Q93009 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
USP7Q93009 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.9■□□□□ 0.62
USP7Q93009 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
USP7Q93009 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.9■□□□□ 0.62
USP7Q93009 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP7Q93009 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP7Q93009 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
USP7Q93009 ARMC10P1-201ENST00000313754 855 ntBASIC18.9■□□□□ 0.62
USP7Q93009 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.9■□□□□ 0.62
USP7Q93009 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.9■□□□□ 0.62
USP7Q93009 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.9■□□□□ 0.62
USP7Q93009 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.9■□□□□ 0.62
USP7Q93009 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms