Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
ATL1Q8WXF7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.74■□□□□ 0.59
ATL1Q8WXF7 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATL1Q8WXF7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATL1Q8WXF7 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATL1Q8WXF7 BX323043.1-201ENST00000641006 1765 ntBASIC18.73■□□□□ 0.59
ATL1Q8WXF7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ATL1Q8WXF7 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.73■□□□□ 0.59
ATL1Q8WXF7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.73■□□□□ 0.59
ATL1Q8WXF7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.73■□□□□ 0.59
ATL1Q8WXF7 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ATL1Q8WXF7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ATL1Q8WXF7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.73■□□□□ 0.59
ATL1Q8WXF7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC18.73■□□□□ 0.59
ATL1Q8WXF7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.73■□□□□ 0.59
ATL1Q8WXF7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
ATL1Q8WXF7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATL1Q8WXF7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATL1Q8WXF7 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ATL1Q8WXF7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.72■□□□□ 0.59
ATL1Q8WXF7 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATL1Q8WXF7 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATL1Q8WXF7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.72■□□□□ 0.59
ATL1Q8WXF7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATL1Q8WXF7 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATL1Q8WXF7 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
ATL1Q8WXF7 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATL1Q8WXF7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATL1Q8WXF7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATL1Q8WXF7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.72■□□□□ 0.59
ATL1Q8WXF7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATL1Q8WXF7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATL1Q8WXF7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATL1Q8WXF7 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.72■□□□□ 0.59
ATL1Q8WXF7 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.72■□□□□ 0.59
ATL1Q8WXF7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATL1Q8WXF7 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC18.72■□□□□ 0.59
ATL1Q8WXF7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.72■□□□□ 0.59
ATL1Q8WXF7 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.72■□□□□ 0.59
ATL1Q8WXF7 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.72■□□□□ 0.59
ATL1Q8WXF7 FAM197Y4-202ENST00000622692 608 ntBASIC18.72■□□□□ 0.59
ATL1Q8WXF7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATL1Q8WXF7 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
ATL1Q8WXF7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ATL1Q8WXF7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATL1Q8WXF7 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATL1Q8WXF7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ATL1Q8WXF7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATL1Q8WXF7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATL1Q8WXF7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATL1Q8WXF7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATL1Q8WXF7 TEX21P-204ENST00000641479 1693 ntBASIC18.71■□□□□ 0.59
ATL1Q8WXF7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATL1Q8WXF7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATL1Q8WXF7 AP002982.1-201ENST00000492365 877 ntBASIC18.71■□□□□ 0.59
ATL1Q8WXF7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.71■□□□□ 0.59
ATL1Q8WXF7 AL353708.3-201ENST00000610272 989 ntBASIC18.71■□□□□ 0.59
ATL1Q8WXF7 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.71■□□□□ 0.59
ATL1Q8WXF7 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
ATL1Q8WXF7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATL1Q8WXF7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATL1Q8WXF7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATL1Q8WXF7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ATL1Q8WXF7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
ATL1Q8WXF7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.71■□□□□ 0.58
ATL1Q8WXF7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATL1Q8WXF7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
ATL1Q8WXF7 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATL1Q8WXF7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
ATL1Q8WXF7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.7■□□□□ 0.58
ATL1Q8WXF7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATL1Q8WXF7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATL1Q8WXF7 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.7■□□□□ 0.58
ATL1Q8WXF7 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATL1Q8WXF7 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATL1Q8WXF7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATL1Q8WXF7 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATL1Q8WXF7 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.7■□□□□ 0.58
ATL1Q8WXF7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ATL1Q8WXF7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATL1Q8WXF7 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
ATL1Q8WXF7 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.7■□□□□ 0.58
ATL1Q8WXF7 AL445675.2-201ENST00000620291 557 ntBASIC18.7■□□□□ 0.58
ATL1Q8WXF7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATL1Q8WXF7 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ATL1Q8WXF7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATL1Q8WXF7 HTR7P1-201ENST00000538670 1336 ntBASIC18.7■□□□□ 0.58
ATL1Q8WXF7 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC18.7■□□□□ 0.58
ATL1Q8WXF7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATL1Q8WXF7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC18.7■□□□□ 0.58
ATL1Q8WXF7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.7■□□□□ 0.58
ATL1Q8WXF7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
ATL1Q8WXF7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ATL1Q8WXF7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ATL1Q8WXF7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.7■□□□□ 0.58
ATL1Q8WXF7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ATL1Q8WXF7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ATL1Q8WXF7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATL1Q8WXF7 AC120498.9-201ENST00000339021 3867 ntBASIC18.69■□□□□ 0.58
ATL1Q8WXF7 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms