Protein–RNA interactions for Protein: Q8TD26

CHD6, Chromodomain-helicase-DNA-binding protein 6, humanhuman

Predictions only

Length 2,715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6Q8TD26 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.37■□□□□ 0.37
CHD6Q8TD26 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.36■□□□□ 0.37
CHD6Q8TD26 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHD6Q8TD26 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHD6Q8TD26 RNA5SP415-201ENST00000517246 115 ntBASIC17.36■□□□□ 0.37
CHD6Q8TD26 AL359881.2-201ENST00000602973 570 ntBASIC17.36■□□□□ 0.37
CHD6Q8TD26 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CHD6Q8TD26 AL355877.3-201ENST00000622820 899 ntBASIC17.36■□□□□ 0.37
CHD6Q8TD26 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHD6Q8TD26 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.36■□□□□ 0.37
CHD6Q8TD26 AL391807.1-203ENST00000604392 2365 ntBASIC17.36■□□□□ 0.37
CHD6Q8TD26 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.36■□□□□ 0.37
CHD6Q8TD26 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHD6Q8TD26 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CHD6Q8TD26 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHD6Q8TD26 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
CHD6Q8TD26 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC17.36■□□□□ 0.37
CHD6Q8TD26 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.36■□□□□ 0.37
CHD6Q8TD26 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CHD6Q8TD26 AC093028.1-201ENST00000622998 982 ntBASIC17.36■□□□□ 0.37
CHD6Q8TD26 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.36■□□□□ 0.37
CHD6Q8TD26 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHD6Q8TD26 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CHD6Q8TD26 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHD6Q8TD26 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHD6Q8TD26 BEX3-201ENST00000361298 921 ntTSL 2 BASIC17.35■□□□□ 0.37
CHD6Q8TD26 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.35■□□□□ 0.37
CHD6Q8TD26 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17.35■□□□□ 0.37
CHD6Q8TD26 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.35■□□□□ 0.37
CHD6Q8TD26 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.35■□□□□ 0.37
CHD6Q8TD26 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CHD6Q8TD26 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.35■□□□□ 0.37
CHD6Q8TD26 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.35■□□□□ 0.37
CHD6Q8TD26 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.35■□□□□ 0.37
CHD6Q8TD26 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.35■□□□□ 0.37
CHD6Q8TD26 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.35■□□□□ 0.37
CHD6Q8TD26 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC17.35■□□□□ 0.37
CHD6Q8TD26 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.35■□□□□ 0.37
CHD6Q8TD26 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CHD6Q8TD26 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.35■□□□□ 0.37
CHD6Q8TD26 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.35■□□□□ 0.37
CHD6Q8TD26 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CHD6Q8TD26 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.34■□□□□ 0.37
CHD6Q8TD26 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHD6Q8TD26 MIR4745-201ENST00000577608 62 ntBASIC17.34■□□□□ 0.37
CHD6Q8TD26 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.34■□□□□ 0.37
CHD6Q8TD26 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHD6Q8TD26 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHD6Q8TD26 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
CHD6Q8TD26 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHD6Q8TD26 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHD6Q8TD26 NOP2-220ENST00000545915 630 ntTSL 2 BASIC17.34■□□□□ 0.37
CHD6Q8TD26 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.34■□□□□ 0.37
CHD6Q8TD26 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHD6Q8TD26 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHD6Q8TD26 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CHD6Q8TD26 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.34■□□□□ 0.37
CHD6Q8TD26 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CHD6Q8TD26 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CHD6Q8TD26 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
CHD6Q8TD26 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.34■□□□□ 0.37
CHD6Q8TD26 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.34■□□□□ 0.37
CHD6Q8TD26 AC079602.3-201ENST00000623931 403 ntBASIC17.34■□□□□ 0.37
CHD6Q8TD26 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.33■□□□□ 0.37
CHD6Q8TD26 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.33■□□□□ 0.37
CHD6Q8TD26 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC17.33■□□□□ 0.36
CHD6Q8TD26 AC091607.1-201ENST00000490318 1060 ntBASIC17.33■□□□□ 0.36
CHD6Q8TD26 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.33■□□□□ 0.36
CHD6Q8TD26 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.33■□□□□ 0.36
CHD6Q8TD26 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.33■□□□□ 0.36
CHD6Q8TD26 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.33■□□□□ 0.36
CHD6Q8TD26 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHD6Q8TD26 AC036111.1-201ENST00000533973 1582 ntBASIC17.33■□□□□ 0.36
CHD6Q8TD26 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHD6Q8TD26 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHD6Q8TD26 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHD6Q8TD26 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.33■□□□□ 0.36
CHD6Q8TD26 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CHD6Q8TD26 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CHD6Q8TD26 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.33■□□□□ 0.36
CHD6Q8TD26 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC17.33■□□□□ 0.36
CHD6Q8TD26 AJ011932.1-201ENST00000621707 465 ntBASIC17.33■□□□□ 0.36
CHD6Q8TD26 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.33■□□□□ 0.36
CHD6Q8TD26 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.32■□□□□ 0.36
CHD6Q8TD26 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHD6Q8TD26 MCCD1P2-201ENST00000423228 335 ntBASIC17.32■□□□□ 0.36
CHD6Q8TD26 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.32■□□□□ 0.36
CHD6Q8TD26 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.32■□□□□ 0.36
CHD6Q8TD26 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.32■□□□□ 0.36
CHD6Q8TD26 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.32■□□□□ 0.36
CHD6Q8TD26 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHD6Q8TD26 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHD6Q8TD26 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
CHD6Q8TD26 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CHD6Q8TD26 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CHD6Q8TD26 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC17.32■□□□□ 0.36
CHD6Q8TD26 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.32■□□□□ 0.36
CHD6Q8TD26 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.32■□□□□ 0.36
CHD6Q8TD26 AL591684.3-201ENST00000605187 298 ntBASIC17.32■□□□□ 0.36
CHD6Q8TD26 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms