Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHKBP1Q8TBC3 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SHKBP1Q8TBC3 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SHKBP1Q8TBC3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SHKBP1Q8TBC3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
SHKBP1Q8TBC3 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SHKBP1Q8TBC3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHKBP1Q8TBC3 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHKBP1Q8TBC3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SHKBP1Q8TBC3 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SHKBP1Q8TBC3 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHKBP1Q8TBC3 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHKBP1Q8TBC3 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
SHKBP1Q8TBC3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHKBP1Q8TBC3 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHKBP1Q8TBC3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SHKBP1Q8TBC3 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHKBP1Q8TBC3 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHKBP1Q8TBC3 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.14■□□□□ 0.81
SHKBP1Q8TBC3 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.14■□□□□ 0.81
SHKBP1Q8TBC3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.14■□□□□ 0.81
SHKBP1Q8TBC3 TSPY17P-201ENST00000450329 467 ntBASIC20.14■□□□□ 0.81
SHKBP1Q8TBC3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SHKBP1Q8TBC3 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.14■□□□□ 0.81
SHKBP1Q8TBC3 AL353719.1-201ENST00000566847 864 ntBASIC20.14■□□□□ 0.81
SHKBP1Q8TBC3 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.14■□□□□ 0.81
SHKBP1Q8TBC3 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
SHKBP1Q8TBC3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.14■□□□□ 0.81
SHKBP1Q8TBC3 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHKBP1Q8TBC3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
SHKBP1Q8TBC3 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.14■□□□□ 0.81
SHKBP1Q8TBC3 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SHKBP1Q8TBC3 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHKBP1Q8TBC3 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.13■□□□□ 0.81
SHKBP1Q8TBC3 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SHKBP1Q8TBC3 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHKBP1Q8TBC3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHKBP1Q8TBC3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.13■□□□□ 0.81
SHKBP1Q8TBC3 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHKBP1Q8TBC3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHKBP1Q8TBC3 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.13■□□□□ 0.81
SHKBP1Q8TBC3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHKBP1Q8TBC3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SHKBP1Q8TBC3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHKBP1Q8TBC3 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC20.13■□□□□ 0.81
SHKBP1Q8TBC3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.13■□□□□ 0.81
SHKBP1Q8TBC3 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.13■□□□□ 0.81
SHKBP1Q8TBC3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
SHKBP1Q8TBC3 CKBP1-201ENST00000565489 1086 ntBASIC20.13■□□□□ 0.81
SHKBP1Q8TBC3 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
SHKBP1Q8TBC3 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SHKBP1Q8TBC3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHKBP1Q8TBC3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHKBP1Q8TBC3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.13■□□□□ 0.81
SHKBP1Q8TBC3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHKBP1Q8TBC3 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SHKBP1Q8TBC3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SHKBP1Q8TBC3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SHKBP1Q8TBC3 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
SHKBP1Q8TBC3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SHKBP1Q8TBC3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.12■□□□□ 0.81
SHKBP1Q8TBC3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.12■□□□□ 0.81
SHKBP1Q8TBC3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHKBP1Q8TBC3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.12■□□□□ 0.81
SHKBP1Q8TBC3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.12■□□□□ 0.81
SHKBP1Q8TBC3 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHKBP1Q8TBC3 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHKBP1Q8TBC3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHKBP1Q8TBC3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
SHKBP1Q8TBC3 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SHKBP1Q8TBC3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHKBP1Q8TBC3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHKBP1Q8TBC3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHKBP1Q8TBC3 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.12■□□□□ 0.81
SHKBP1Q8TBC3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHKBP1Q8TBC3 YBX1P2-201ENST00000489612 999 ntBASIC20.12■□□□□ 0.81
SHKBP1Q8TBC3 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SHKBP1Q8TBC3 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SHKBP1Q8TBC3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
SHKBP1Q8TBC3 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHKBP1Q8TBC3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SHKBP1Q8TBC3 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHKBP1Q8TBC3 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SHKBP1Q8TBC3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHKBP1Q8TBC3 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.11■□□□□ 0.81
SHKBP1Q8TBC3 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHKBP1Q8TBC3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
SHKBP1Q8TBC3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
SHKBP1Q8TBC3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHKBP1Q8TBC3 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHKBP1Q8TBC3 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SHKBP1Q8TBC3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.11■□□□□ 0.81
SHKBP1Q8TBC3 RNF152P1-201ENST00000397754 604 ntBASIC20.11■□□□□ 0.81
SHKBP1Q8TBC3 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SHKBP1Q8TBC3 CA15P1-201ENST00000481698 905 ntBASIC20.11■□□□□ 0.81
SHKBP1Q8TBC3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.11■□□□□ 0.81
SHKBP1Q8TBC3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.11■□□□□ 0.81
SHKBP1Q8TBC3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.11■□□□□ 0.81
SHKBP1Q8TBC3 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
SHKBP1Q8TBC3 AC141257.4-201ENST00000634557 245 ntBASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms