Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AP000523.1-201ENST00000398242 1049 ntBASIC23.65■■□□□ 1.38
RTL9Q8NET4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
RTL9Q8NET4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
RTL9Q8NET4 AC092647.4-201ENST00000457211 535 ntBASIC23.65■■□□□ 1.38
RTL9Q8NET4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC23.65■■□□□ 1.38
RTL9Q8NET4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC23.65■■□□□ 1.38
RTL9Q8NET4 LINC01521-201ENST00000504184 1943 ntBASIC23.65■■□□□ 1.38
RTL9Q8NET4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RTL9Q8NET4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RTL9Q8NET4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC23.65■■□□□ 1.38
RTL9Q8NET4 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
RTL9Q8NET4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC23.65■■□□□ 1.38
RTL9Q8NET4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC23.65■■□□□ 1.38
RTL9Q8NET4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.65■■□□□ 1.38
RTL9Q8NET4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC23.65■■□□□ 1.38
RTL9Q8NET4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC23.65■■□□□ 1.38
RTL9Q8NET4 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC23.65■■□□□ 1.38
RTL9Q8NET4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC23.65■■□□□ 1.38
RTL9Q8NET4 AP000550.4-202ENST00000639755 178 ntBASIC23.65■■□□□ 1.38
RTL9Q8NET4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RTL9Q8NET4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC23.64■■□□□ 1.37
RTL9Q8NET4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
RTL9Q8NET4 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RTL9Q8NET4 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RTL9Q8NET4 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RTL9Q8NET4 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC23.64■■□□□ 1.37
RTL9Q8NET4 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
RTL9Q8NET4 KRT18P56-201ENST00000507275 550 ntBASIC23.64■■□□□ 1.37
RTL9Q8NET4 FAM86EP-206ENST00000510506 987 ntBASIC23.64■■□□□ 1.37
RTL9Q8NET4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC23.64■■□□□ 1.37
RTL9Q8NET4 ETFA-216ENST00000560726 942 ntTSL 3 BASIC23.64■■□□□ 1.37
RTL9Q8NET4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
RTL9Q8NET4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC23.64■■□□□ 1.37
RTL9Q8NET4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC23.64■■□□□ 1.37
RTL9Q8NET4 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTL9Q8NET4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTL9Q8NET4 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC23.63■■□□□ 1.37
RTL9Q8NET4 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RTL9Q8NET4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC23.63■■□□□ 1.37
RTL9Q8NET4 GAS2L1P1-201ENST00000420145 1480 ntBASIC23.63■■□□□ 1.37
RTL9Q8NET4 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTL9Q8NET4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC23.63■■□□□ 1.37
RTL9Q8NET4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTL9Q8NET4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTL9Q8NET4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC23.63■■□□□ 1.37
RTL9Q8NET4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC23.63■■□□□ 1.37
RTL9Q8NET4 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTL9Q8NET4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
RTL9Q8NET4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC23.63■■□□□ 1.37
RTL9Q8NET4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC23.63■■□□□ 1.37
RTL9Q8NET4 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC23.63■■□□□ 1.37
RTL9Q8NET4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC23.63■■□□□ 1.37
RTL9Q8NET4 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTL9Q8NET4 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC23.63■■□□□ 1.37
RTL9Q8NET4 AL121956.5-201ENST00000625261 221 ntBASIC23.63■■□□□ 1.37
RTL9Q8NET4 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC23.63■■□□□ 1.37
RTL9Q8NET4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
RTL9Q8NET4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
RTL9Q8NET4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
RTL9Q8NET4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC23.62■■□□□ 1.37
RTL9Q8NET4 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC23.62■■□□□ 1.37
RTL9Q8NET4 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RTL9Q8NET4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
RTL9Q8NET4 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
RTL9Q8NET4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RTL9Q8NET4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
RTL9Q8NET4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
RTL9Q8NET4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC23.62■■□□□ 1.37
RTL9Q8NET4 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC23.62■■□□□ 1.37
RTL9Q8NET4 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
RTL9Q8NET4 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC23.62■■□□□ 1.37
RTL9Q8NET4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
RTL9Q8NET4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC23.62■■□□□ 1.37
RTL9Q8NET4 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RTL9Q8NET4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RTL9Q8NET4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
RTL9Q8NET4 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC23.61■■□□□ 1.37
RTL9Q8NET4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RTL9Q8NET4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC23.61■■□□□ 1.37
RTL9Q8NET4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RTL9Q8NET4 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RTL9Q8NET4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RTL9Q8NET4 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC23.61■■□□□ 1.37
RTL9Q8NET4 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
RTL9Q8NET4 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC23.61■■□□□ 1.37
RTL9Q8NET4 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RTL9Q8NET4 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
RTL9Q8NET4 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC23.61■■□□□ 1.37
RTL9Q8NET4 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC23.61■■□□□ 1.37
RTL9Q8NET4 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RTL9Q8NET4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC23.61■■□□□ 1.37
RTL9Q8NET4 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC23.61■■□□□ 1.37
RTL9Q8NET4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
RTL9Q8NET4 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RTL9Q8NET4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
RTL9Q8NET4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
RTL9Q8NET4 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
RTL9Q8NET4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC23.6■■□□□ 1.37
RTL9Q8NET4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
RTL9Q8NET4 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms