Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF248Q8NDW4 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ZNF248Q8NDW4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.34■□□□□ 0.53
ZNF248Q8NDW4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF248Q8NDW4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF248Q8NDW4 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF248Q8NDW4 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF248Q8NDW4 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF248Q8NDW4 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF248Q8NDW4 AL441883.1-201ENST00000566170 1045 ntBASIC18.34■□□□□ 0.53
ZNF248Q8NDW4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
ZNF248Q8NDW4 AL023973.1-201ENST00000624619 620 ntBASIC18.34■□□□□ 0.53
ZNF248Q8NDW4 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF248Q8NDW4 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF248Q8NDW4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF248Q8NDW4 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF248Q8NDW4 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF248Q8NDW4 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ZNF248Q8NDW4 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF248Q8NDW4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
ZNF248Q8NDW4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF248Q8NDW4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF248Q8NDW4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.33■□□□□ 0.53
ZNF248Q8NDW4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF248Q8NDW4 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
ZNF248Q8NDW4 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF248Q8NDW4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
ZNF248Q8NDW4 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF248Q8NDW4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF248Q8NDW4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF248Q8NDW4 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.33■□□□□ 0.53
ZNF248Q8NDW4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF248Q8NDW4 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF248Q8NDW4 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF248Q8NDW4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.33■□□□□ 0.52
ZNF248Q8NDW4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.33■□□□□ 0.52
ZNF248Q8NDW4 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF248Q8NDW4 CA15P1-201ENST00000481698 905 ntBASIC18.33■□□□□ 0.52
ZNF248Q8NDW4 PRSS44-201ENST00000515154 1146 ntBASIC18.33■□□□□ 0.52
ZNF248Q8NDW4 AL136038.3-201ENST00000561909 1096 ntBASIC18.33■□□□□ 0.52
ZNF248Q8NDW4 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.33■□□□□ 0.52
ZNF248Q8NDW4 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF248Q8NDW4 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
ZNF248Q8NDW4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF248Q8NDW4 AC092720.2-201ENST00000602388 1665 ntBASIC18.33■□□□□ 0.52
ZNF248Q8NDW4 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
ZNF248Q8NDW4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC18.33■□□□□ 0.52
ZNF248Q8NDW4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF248Q8NDW4 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
ZNF248Q8NDW4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.33■□□□□ 0.52
ZNF248Q8NDW4 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.33■□□□□ 0.52
ZNF248Q8NDW4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF248Q8NDW4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF248Q8NDW4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF248Q8NDW4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF248Q8NDW4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ZNF248Q8NDW4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF248Q8NDW4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ZNF248Q8NDW4 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF248Q8NDW4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.32■□□□□ 0.52
ZNF248Q8NDW4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF248Q8NDW4 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF248Q8NDW4 AP000523.1-201ENST00000398242 1049 ntBASIC18.32■□□□□ 0.52
ZNF248Q8NDW4 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF248Q8NDW4 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC18.32■□□□□ 0.52
ZNF248Q8NDW4 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF248Q8NDW4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF248Q8NDW4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.32■□□□□ 0.52
ZNF248Q8NDW4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.32■□□□□ 0.52
ZNF248Q8NDW4 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF248Q8NDW4 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.32■□□□□ 0.52
ZNF248Q8NDW4 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF248Q8NDW4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF248Q8NDW4 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.32■□□□□ 0.52
ZNF248Q8NDW4 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF248Q8NDW4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF248Q8NDW4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ZNF248Q8NDW4 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ZNF248Q8NDW4 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ZNF248Q8NDW4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF248Q8NDW4 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF248Q8NDW4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ZNF248Q8NDW4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.31■□□□□ 0.52
ZNF248Q8NDW4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.31■□□□□ 0.52
ZNF248Q8NDW4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF248Q8NDW4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.31■□□□□ 0.52
ZNF248Q8NDW4 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF248Q8NDW4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.31■□□□□ 0.52
ZNF248Q8NDW4 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.31■□□□□ 0.52
ZNF248Q8NDW4 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.31■□□□□ 0.52
ZNF248Q8NDW4 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.31■□□□□ 0.52
ZNF248Q8NDW4 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.31■□□□□ 0.52
ZNF248Q8NDW4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.31■□□□□ 0.52
ZNF248Q8NDW4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.31■□□□□ 0.52
ZNF248Q8NDW4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.31■□□□□ 0.52
ZNF248Q8NDW4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.31■□□□□ 0.52
ZNF248Q8NDW4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF248Q8NDW4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF248Q8NDW4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF248Q8NDW4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms