Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CCDC63Q8NA47 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC63Q8NA47 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC63Q8NA47 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC63Q8NA47 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC63Q8NA47 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
CCDC63Q8NA47 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC63Q8NA47 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC63Q8NA47 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CCDC63Q8NA47 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC63Q8NA47 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC63Q8NA47 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC63Q8NA47 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC63Q8NA47 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.45■□□□□ 0.7
CCDC63Q8NA47 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC63Q8NA47 AC137761.2-201ENST00000561729 223 ntBASIC19.45■□□□□ 0.7
CCDC63Q8NA47 AC145350.3-201ENST00000569033 163 ntBASIC19.45■□□□□ 0.7
CCDC63Q8NA47 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.45■□□□□ 0.7
CCDC63Q8NA47 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC63Q8NA47 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC63Q8NA47 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC63Q8NA47 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC63Q8NA47 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC63Q8NA47 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC63Q8NA47 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC63Q8NA47 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC63Q8NA47 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.45■□□□□ 0.7
CCDC63Q8NA47 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
CCDC63Q8NA47 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC63Q8NA47 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
CCDC63Q8NA47 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CCDC63Q8NA47 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CCDC63Q8NA47 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC63Q8NA47 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
CCDC63Q8NA47 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC63Q8NA47 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC63Q8NA47 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC63Q8NA47 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC63Q8NA47 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC19.44■□□□□ 0.7
CCDC63Q8NA47 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC63Q8NA47 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.44■□□□□ 0.7
CCDC63Q8NA47 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.44■□□□□ 0.7
CCDC63Q8NA47 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC63Q8NA47 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC63Q8NA47 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC63Q8NA47 AL161938.1-201ENST00000569833 2180 ntBASIC19.44■□□□□ 0.7
CCDC63Q8NA47 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC63Q8NA47 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC63Q8NA47 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC63Q8NA47 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.44■□□□□ 0.7
CCDC63Q8NA47 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
CCDC63Q8NA47 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CCDC63Q8NA47 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.44■□□□□ 0.7
CCDC63Q8NA47 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.43■□□□□ 0.7
CCDC63Q8NA47 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.43■□□□□ 0.7
CCDC63Q8NA47 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC63Q8NA47 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
CCDC63Q8NA47 AC006333.2-201ENST00000607957 2099 ntBASIC19.42■□□□□ 0.7
CCDC63Q8NA47 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC63Q8NA47 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC63Q8NA47 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CCDC63Q8NA47 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CCDC63Q8NA47 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.42■□□□□ 0.7
CCDC63Q8NA47 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms