Protein–RNA interactions for Protein: Q8N7C3

TRIML2, Probable E3 ubiquitin-protein ligase TRIML2, humanhuman

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIML2Q8N7C3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIML2Q8N7C3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIML2Q8N7C3 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIML2Q8N7C3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIML2Q8N7C3 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIML2Q8N7C3 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIML2Q8N7C3 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIML2Q8N7C3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIML2Q8N7C3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TRIML2Q8N7C3 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIML2Q8N7C3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIML2Q8N7C3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIML2Q8N7C3 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIML2Q8N7C3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
TRIML2Q8N7C3 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TRIML2Q8N7C3 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIML2Q8N7C3 AL390719.1-204ENST00000412397 1219 ntBASIC18.52■□□□□ 0.56
TRIML2Q8N7C3 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.52■□□□□ 0.56
TRIML2Q8N7C3 AF201337.1-201ENST00000520239 748 ntBASIC18.52■□□□□ 0.56
TRIML2Q8N7C3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIML2Q8N7C3 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
TRIML2Q8N7C3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TRIML2Q8N7C3 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIML2Q8N7C3 AC080038.1-201ENST00000611274 1154 ntBASIC18.52■□□□□ 0.56
TRIML2Q8N7C3 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIML2Q8N7C3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIML2Q8N7C3 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIML2Q8N7C3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIML2Q8N7C3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIML2Q8N7C3 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
TRIML2Q8N7C3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRIML2Q8N7C3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRIML2Q8N7C3 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.52■□□□□ 0.55
TRIML2Q8N7C3 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
TRIML2Q8N7C3 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.52■□□□□ 0.55
TRIML2Q8N7C3 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRIML2Q8N7C3 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIML2Q8N7C3 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
TRIML2Q8N7C3 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TRIML2Q8N7C3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIML2Q8N7C3 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
TRIML2Q8N7C3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIML2Q8N7C3 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIML2Q8N7C3 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIML2Q8N7C3 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIML2Q8N7C3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRIML2Q8N7C3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIML2Q8N7C3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIML2Q8N7C3 GPX1P1-201ENST00000388829 606 ntBASIC18.51■□□□□ 0.55
TRIML2Q8N7C3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.51■□□□□ 0.55
TRIML2Q8N7C3 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.51■□□□□ 0.55
TRIML2Q8N7C3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIML2Q8N7C3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIML2Q8N7C3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIML2Q8N7C3 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRIML2Q8N7C3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TRIML2Q8N7C3 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIML2Q8N7C3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIML2Q8N7C3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIML2Q8N7C3 AC018553.1-201ENST00000616682 1458 ntBASIC18.51■□□□□ 0.55
TRIML2Q8N7C3 AL390961.4-201ENST00000623958 2535 ntBASIC18.51■□□□□ 0.55
TRIML2Q8N7C3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIML2Q8N7C3 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIML2Q8N7C3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIML2Q8N7C3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIML2Q8N7C3 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIML2Q8N7C3 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TRIML2Q8N7C3 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIML2Q8N7C3 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIML2Q8N7C3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
TRIML2Q8N7C3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIML2Q8N7C3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIML2Q8N7C3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.5■□□□□ 0.55
TRIML2Q8N7C3 AC105036.2-201ENST00000569468 176 ntBASIC18.5■□□□□ 0.55
TRIML2Q8N7C3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TRIML2Q8N7C3 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIML2Q8N7C3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIML2Q8N7C3 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
TRIML2Q8N7C3 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIML2Q8N7C3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIML2Q8N7C3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIML2Q8N7C3 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIML2Q8N7C3 AC116351.2-201ENST00000606540 1585 ntBASIC18.5■□□□□ 0.55
TRIML2Q8N7C3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIML2Q8N7C3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIML2Q8N7C3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIML2Q8N7C3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIML2Q8N7C3 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIML2Q8N7C3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIML2Q8N7C3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.5■□□□□ 0.55
TRIML2Q8N7C3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIML2Q8N7C3 AL032819.2-201ENST00000624543 2162 ntBASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRIML2Q8N7C3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms