Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CPSF7Q8N684 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CPSF7Q8N684 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.75■□□□□ 0.59
CPSF7Q8N684 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.75■□□□□ 0.59
CPSF7Q8N684 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
CPSF7Q8N684 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CPSF7Q8N684 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CPSF7Q8N684 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.75■□□□□ 0.59
CPSF7Q8N684 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CPSF7Q8N684 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CPSF7Q8N684 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CPSF7Q8N684 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.74■□□□□ 0.59
CPSF7Q8N684 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPSF7Q8N684 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.74■□□□□ 0.59
CPSF7Q8N684 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPSF7Q8N684 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPSF7Q8N684 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CPSF7Q8N684 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPSF7Q8N684 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPSF7Q8N684 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.74■□□□□ 0.59
CPSF7Q8N684 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPSF7Q8N684 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CPSF7Q8N684 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CPSF7Q8N684 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.74■□□□□ 0.59
CPSF7Q8N684 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CPSF7Q8N684 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CPSF7Q8N684 ADM-205ENST00000528544 586 ntTSL 2 BASIC18.74■□□□□ 0.59
CPSF7Q8N684 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.74■□□□□ 0.59
CPSF7Q8N684 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CPSF7Q8N684 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.74■□□□□ 0.59
CPSF7Q8N684 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CPSF7Q8N684 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CPSF7Q8N684 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPSF7Q8N684 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CPSF7Q8N684 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPSF7Q8N684 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.74■□□□□ 0.59
CPSF7Q8N684 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPSF7Q8N684 ZNF815P-204ENST00000434898 1737 ntBASIC18.74■□□□□ 0.59
CPSF7Q8N684 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CPSF7Q8N684 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.74■□□□□ 0.59
CPSF7Q8N684 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPSF7Q8N684 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CPSF7Q8N684 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPSF7Q8N684 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CPSF7Q8N684 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPSF7Q8N684 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPSF7Q8N684 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.73■□□□□ 0.59
CPSF7Q8N684 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPSF7Q8N684 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CPSF7Q8N684 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPSF7Q8N684 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPSF7Q8N684 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.73■□□□□ 0.59
CPSF7Q8N684 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPSF7Q8N684 AC116351.2-201ENST00000606540 1585 ntBASIC18.73■□□□□ 0.59
CPSF7Q8N684 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.73■□□□□ 0.59
CPSF7Q8N684 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPSF7Q8N684 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPSF7Q8N684 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CPSF7Q8N684 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
CPSF7Q8N684 UNC93B5-201ENST00000530315 699 ntBASIC18.73■□□□□ 0.59
CPSF7Q8N684 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.73■□□□□ 0.59
CPSF7Q8N684 AC006058.3-201ENST00000606217 1069 ntBASIC18.73■□□□□ 0.59
CPSF7Q8N684 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPSF7Q8N684 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CPSF7Q8N684 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPSF7Q8N684 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.73■□□□□ 0.59
CPSF7Q8N684 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.73■□□□□ 0.59
CPSF7Q8N684 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CPSF7Q8N684 BICD1-207ENST00000551848 1962 ntBASIC18.73■□□□□ 0.59
CPSF7Q8N684 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.73■□□□□ 0.59
CPSF7Q8N684 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CPSF7Q8N684 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.73■□□□□ 0.59
CPSF7Q8N684 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
CPSF7Q8N684 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.73■□□□□ 0.59
CPSF7Q8N684 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPSF7Q8N684 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CPSF7Q8N684 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
CPSF7Q8N684 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CPSF7Q8N684 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CPSF7Q8N684 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CPSF7Q8N684 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPSF7Q8N684 FP475955.4-201ENST00000623131 1990 ntBASIC18.72■□□□□ 0.59
CPSF7Q8N684 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPSF7Q8N684 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.72■□□□□ 0.59
CPSF7Q8N684 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CPSF7Q8N684 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CPSF7Q8N684 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.72■□□□□ 0.59
CPSF7Q8N684 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CPSF7Q8N684 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.72■□□□□ 0.59
CPSF7Q8N684 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CPSF7Q8N684 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.72■□□□□ 0.59
CPSF7Q8N684 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CPSF7Q8N684 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPSF7Q8N684 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPSF7Q8N684 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPSF7Q8N684 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.71■□□□□ 0.59
CPSF7Q8N684 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CPSF7Q8N684 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPSF7Q8N684 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CPSF7Q8N684 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms