Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.68■□□□□ 0.74
ATPAF2Q8N5M1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATPAF2Q8N5M1 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
ATPAF2Q8N5M1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATPAF2Q8N5M1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
ATPAF2Q8N5M1 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATPAF2Q8N5M1 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATPAF2Q8N5M1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
ATPAF2Q8N5M1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
ATPAF2Q8N5M1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATPAF2Q8N5M1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.67■□□□□ 0.74
ATPAF2Q8N5M1 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATPAF2Q8N5M1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATPAF2Q8N5M1 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATPAF2Q8N5M1 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATPAF2Q8N5M1 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
ATPAF2Q8N5M1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATPAF2Q8N5M1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATPAF2Q8N5M1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATPAF2Q8N5M1 AC012618.2-201ENST00000428058 849 ntBASIC19.67■□□□□ 0.74
ATPAF2Q8N5M1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.67■□□□□ 0.74
ATPAF2Q8N5M1 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.67■□□□□ 0.74
ATPAF2Q8N5M1 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATPAF2Q8N5M1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.67■□□□□ 0.74
ATPAF2Q8N5M1 Z85996.1-201ENST00000494644 937 ntBASIC19.67■□□□□ 0.74
ATPAF2Q8N5M1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.67■□□□□ 0.74
ATPAF2Q8N5M1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.67■□□□□ 0.74
ATPAF2Q8N5M1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.67■□□□□ 0.74
ATPAF2Q8N5M1 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATPAF2Q8N5M1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATPAF2Q8N5M1 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATPAF2Q8N5M1 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATPAF2Q8N5M1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATPAF2Q8N5M1 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.67■□□□□ 0.74
ATPAF2Q8N5M1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATPAF2Q8N5M1 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
ATPAF2Q8N5M1 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATPAF2Q8N5M1 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
ATPAF2Q8N5M1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
ATPAF2Q8N5M1 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATPAF2Q8N5M1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATPAF2Q8N5M1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATPAF2Q8N5M1 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ATPAF2Q8N5M1 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.66■□□□□ 0.74
ATPAF2Q8N5M1 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATPAF2Q8N5M1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.66■□□□□ 0.74
ATPAF2Q8N5M1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.66■□□□□ 0.74
ATPAF2Q8N5M1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATPAF2Q8N5M1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATPAF2Q8N5M1 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
ATPAF2Q8N5M1 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ATPAF2Q8N5M1 RPS2P55-201ENST00000397318 883 ntBASIC19.66■□□□□ 0.74
ATPAF2Q8N5M1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.66■□□□□ 0.74
ATPAF2Q8N5M1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
ATPAF2Q8N5M1 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATPAF2Q8N5M1 AC107956.1-201ENST00000494359 873 ntBASIC19.66■□□□□ 0.74
ATPAF2Q8N5M1 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.66■□□□□ 0.74
ATPAF2Q8N5M1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
ATPAF2Q8N5M1 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
ATPAF2Q8N5M1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATPAF2Q8N5M1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATPAF2Q8N5M1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.66■□□□□ 0.74
ATPAF2Q8N5M1 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATPAF2Q8N5M1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
ATPAF2Q8N5M1 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
ATPAF2Q8N5M1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATPAF2Q8N5M1 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATPAF2Q8N5M1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.65■□□□□ 0.74
ATPAF2Q8N5M1 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.65■□□□□ 0.74
ATPAF2Q8N5M1 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATPAF2Q8N5M1 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
ATPAF2Q8N5M1 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.65■□□□□ 0.74
ATPAF2Q8N5M1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATPAF2Q8N5M1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATPAF2Q8N5M1 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
ATPAF2Q8N5M1 FAM197Y1-201ENST00000421178 764 ntBASIC19.65■□□□□ 0.74
ATPAF2Q8N5M1 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.65■□□□□ 0.74
ATPAF2Q8N5M1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.65■□□□□ 0.74
ATPAF2Q8N5M1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.65■□□□□ 0.74
ATPAF2Q8N5M1 AC026271.3-201ENST00000571884 352 ntBASIC19.65■□□□□ 0.74
ATPAF2Q8N5M1 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.65■□□□□ 0.74
ATPAF2Q8N5M1 AP001412.1-201ENST00000608405 714 ntBASIC19.65■□□□□ 0.74
ATPAF2Q8N5M1 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.65■□□□□ 0.74
ATPAF2Q8N5M1 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.65■□□□□ 0.74
ATPAF2Q8N5M1 AL031985.4-201ENST00000642138 673 ntBASIC19.65■□□□□ 0.74
ATPAF2Q8N5M1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATPAF2Q8N5M1 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.65■□□□□ 0.74
ATPAF2Q8N5M1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATPAF2Q8N5M1 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
ATPAF2Q8N5M1 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
ATPAF2Q8N5M1 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
ATPAF2Q8N5M1 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.64■□□□□ 0.74
ATPAF2Q8N5M1 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.64■□□□□ 0.74
ATPAF2Q8N5M1 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.74
ATPAF2Q8N5M1 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
ATPAF2Q8N5M1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
ATPAF2Q8N5M1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.64■□□□□ 0.73
ATPAF2Q8N5M1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATPAF2Q8N5M1 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ATPAF2Q8N5M1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms